Hb_070771_010

Information

Type -
Description -
Location Contig70771: 2301-3454
Sequence    

Annotation

kegg
ID rcu:RCOM_0034370
description UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative
nr
ID XP_012064802.1
description PREDICTED: uncharacterized membrane protein At1g06890 [Jatropha curcas]
swissprot
ID Q8RXL8
description Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1
trembl
ID A0A067L6I4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05504 PE=4 SV=1
Gene Ontology
ID GO:0016021
description uncharacterized membrane protein at1g06890-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_070771_010 0.0 - - PREDICTED: uncharacterized membrane protein At1g06890 [Jatropha curcas]
2 Hb_002085_060 0.0387889978 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000339_060 0.0470586639 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
4 Hb_001307_180 0.0489199647 - - PREDICTED: cellulose synthase A catalytic subunit 4 [UDP-forming] isoform X1 [Jatropha curcas]
5 Hb_011912_010 0.050489274 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
6 Hb_003645_040 0.0542782 transcription factor TF Family: MYB hypothetical protein POPTR_0003s13190g [Populus trichocarpa]
7 Hb_003638_020 0.0548117079 - - PREDICTED: uncharacterized protein LOC105645807 [Jatropha curcas]
8 Hb_012633_020 0.0559091959 - - laccase, putative [Ricinus communis]
9 Hb_002499_030 0.0614741973 - - receptor-kinase, putative [Ricinus communis]
10 Hb_000413_030 0.0648417136 - - PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]
11 Hb_064047_020 0.0676874868 transcription factor TF Family: MYB hypothetical protein POPTR_0003s13190g [Populus trichocarpa]
12 Hb_003747_160 0.0684987866 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004225_120 0.0728791445 - - PREDICTED: uncharacterized protein LOC105628059 [Jatropha curcas]
14 Hb_001051_060 0.0734609102 - - UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative [Ricinus communis]
15 Hb_005614_020 0.0752156973 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X1 [Jatropha curcas]
16 Hb_003376_060 0.0755050924 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9 isoform X1 [Jatropha curcas]
17 Hb_000684_190 0.0756198981 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]
18 Hb_004846_110 0.0784772228 - - hypothetical protein JCGZ_04591 [Jatropha curcas]
19 Hb_000964_080 0.0797014037 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
20 Hb_011224_070 0.0806038851 - - PREDICTED: solute carrier family 35 member E3 [Jatropha curcas]

Gene co-expression network

sample Hb_070771_010 Hb_070771_010 Hb_002085_060 Hb_002085_060 Hb_070771_010--Hb_002085_060 Hb_000339_060 Hb_000339_060 Hb_070771_010--Hb_000339_060 Hb_001307_180 Hb_001307_180 Hb_070771_010--Hb_001307_180 Hb_011912_010 Hb_011912_010 Hb_070771_010--Hb_011912_010 Hb_003645_040 Hb_003645_040 Hb_070771_010--Hb_003645_040 Hb_003638_020 Hb_003638_020 Hb_070771_010--Hb_003638_020 Hb_002085_060--Hb_000339_060 Hb_002085_060--Hb_003638_020 Hb_002085_060--Hb_003645_040 Hb_064047_020 Hb_064047_020 Hb_002085_060--Hb_064047_020 Hb_002499_030 Hb_002499_030 Hb_002085_060--Hb_002499_030 Hb_000339_060--Hb_003638_020 Hb_000339_060--Hb_002499_030 Hb_071079_040 Hb_071079_040 Hb_000339_060--Hb_071079_040 Hb_000684_190 Hb_000684_190 Hb_000339_060--Hb_000684_190 Hb_001307_180--Hb_011912_010 Hb_001307_180--Hb_003645_040 Hb_012633_020 Hb_012633_020 Hb_001307_180--Hb_012633_020 Hb_002660_180 Hb_002660_180 Hb_001307_180--Hb_002660_180 Hb_000836_640 Hb_000836_640 Hb_001307_180--Hb_000836_640 Hb_000413_030 Hb_000413_030 Hb_011912_010--Hb_000413_030 Hb_000037_150 Hb_000037_150 Hb_011912_010--Hb_000037_150 Hb_011912_010--Hb_003645_040 Hb_011912_010--Hb_064047_020 Hb_003645_040--Hb_012633_020 Hb_003645_040--Hb_064047_020 Hb_003638_020--Hb_002499_030 Hb_001722_110 Hb_001722_110 Hb_003638_020--Hb_001722_110 Hb_005614_020 Hb_005614_020 Hb_003638_020--Hb_005614_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0341057 11.7233 10.3279 218.631 0.0982883 0.132346
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.805017 88.578

CAGE analysis