Hb_070986_010

Information

Type -
Description -
Location Contig70986: 3103-3989
Sequence    

Annotation

kegg
ID cit:102610102
description macrophage erythroblast attacher-like
nr
ID XP_012073466.1
description PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LFT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06639 PE=4 SV=1
Gene Ontology
ID GO:0005829
description macrophage erythroblast attacher

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55175: 3874-4227
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_070986_010 0.0 - - PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
2 Hb_004204_120 0.0682137527 - - PREDICTED: plant intracellular Ras-group-related LRR protein 7 [Jatropha curcas]
3 Hb_001584_070 0.0701413032 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002105_090 0.0706503582 - - Rab4 [Hevea brasiliensis]
5 Hb_000798_030 0.0710366224 - - PREDICTED: uncharacterized protein LOC105635919 [Jatropha curcas]
6 Hb_010883_150 0.0811880355 - - Ubiquitin-fold modifier 1 precursor, putative [Ricinus communis]
7 Hb_001257_080 0.0842344081 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001824_070 0.084666803 - - H/ACA ribonucleoprotein complex subunit, putative [Ricinus communis]
9 Hb_001818_020 0.0856836893 - - PREDICTED: 60S ribosomal protein L21-1 [Phoenix dactylifera]
10 Hb_000465_060 0.0863567209 - - PREDICTED: 60S ribosomal protein L15-1 isoform X2 [Jatropha curcas]
11 Hb_000007_100 0.0866315165 - - PREDICTED: uncharacterized protein LOC105640717 [Jatropha curcas]
12 Hb_000365_380 0.0870024605 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002518_050 0.0873392016 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM10 [Jatropha curcas]
14 Hb_000371_080 0.0879375331 - - ubiquitin-conjugating enzyme m, putative [Ricinus communis]
15 Hb_003878_190 0.0882846826 - - hypothetical protein POPTR_0011s11040g [Populus trichocarpa]
16 Hb_004657_020 0.0883986713 - - rer1 protein, putative [Ricinus communis]
17 Hb_011931_050 0.0884024385 - - fk506-binding protein, putative [Ricinus communis]
18 Hb_003640_060 0.0884838294 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
19 Hb_000417_110 0.0890527269 - - PREDICTED: uncharacterized protein LOC105649681 [Jatropha curcas]
20 Hb_009711_030 0.089400042 - - PREDICTED: uncharacterized protein LOC105647792 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_070986_010 Hb_070986_010 Hb_004204_120 Hb_004204_120 Hb_070986_010--Hb_004204_120 Hb_001584_070 Hb_001584_070 Hb_070986_010--Hb_001584_070 Hb_002105_090 Hb_002105_090 Hb_070986_010--Hb_002105_090 Hb_000798_030 Hb_000798_030 Hb_070986_010--Hb_000798_030 Hb_010883_150 Hb_010883_150 Hb_070986_010--Hb_010883_150 Hb_001257_080 Hb_001257_080 Hb_070986_010--Hb_001257_080 Hb_002685_190 Hb_002685_190 Hb_004204_120--Hb_002685_190 Hb_002030_040 Hb_002030_040 Hb_004204_120--Hb_002030_040 Hb_001235_190 Hb_001235_190 Hb_004204_120--Hb_001235_190 Hb_000120_750 Hb_000120_750 Hb_004204_120--Hb_000120_750 Hb_004204_120--Hb_000798_030 Hb_000465_060 Hb_000465_060 Hb_001584_070--Hb_000465_060 Hb_000365_380 Hb_000365_380 Hb_001584_070--Hb_000365_380 Hb_001824_070 Hb_001824_070 Hb_001584_070--Hb_001824_070 Hb_012515_010 Hb_012515_010 Hb_001584_070--Hb_012515_010 Hb_000417_110 Hb_000417_110 Hb_001584_070--Hb_000417_110 Hb_001383_060 Hb_001383_060 Hb_001584_070--Hb_001383_060 Hb_000494_020 Hb_000494_020 Hb_002105_090--Hb_000494_020 Hb_004324_310 Hb_004324_310 Hb_002105_090--Hb_004324_310 Hb_032717_080 Hb_032717_080 Hb_002105_090--Hb_032717_080 Hb_001184_090 Hb_001184_090 Hb_002105_090--Hb_001184_090 Hb_010407_040 Hb_010407_040 Hb_002105_090--Hb_010407_040 Hb_000798_030--Hb_000417_110 Hb_000634_050 Hb_000634_050 Hb_000798_030--Hb_000634_050 Hb_000045_190 Hb_000045_190 Hb_000798_030--Hb_000045_190 Hb_007741_050 Hb_007741_050 Hb_000798_030--Hb_007741_050 Hb_010883_150--Hb_001584_070 Hb_008847_020 Hb_008847_020 Hb_010883_150--Hb_008847_020 Hb_000526_150 Hb_000526_150 Hb_010883_150--Hb_000526_150 Hb_000840_190 Hb_000840_190 Hb_010883_150--Hb_000840_190 Hb_002311_320 Hb_002311_320 Hb_010883_150--Hb_002311_320 Hb_000061_330 Hb_000061_330 Hb_010883_150--Hb_000061_330 Hb_002205_080 Hb_002205_080 Hb_001257_080--Hb_002205_080 Hb_001257_080--Hb_007741_050 Hb_007101_150 Hb_007101_150 Hb_001257_080--Hb_007101_150 Hb_002529_100 Hb_002529_100 Hb_001257_080--Hb_002529_100 Hb_022250_040 Hb_022250_040 Hb_001257_080--Hb_022250_040 Hb_001257_080--Hb_000798_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.1332 3.84594 4.51095 5.56897 10.6004 12.4628
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.3374 21.2742 7.54046 5.64267 1.66544

CAGE analysis