Hb_071433_010

Information

Type -
Description -
Location Contig71433: 1-159
Sequence    

Annotation

kegg
ID rcu:RCOM_1483220
description lipid binding protein, putative
nr
ID XP_002524256.1
description lipid binding protein, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SE37
description Lipid binding protein, putative OS=Ricinus communis GN=RCOM_1483220 PE=4 SV=1
Gene Ontology
ID GO:0008233
description protease inhibitor seed storage lipid transfer family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_071433_010 0.0 - - lipid binding protein, putative [Ricinus communis]
2 Hb_036029_020 0.1049650012 - - PREDICTED: patellin-3-like [Jatropha curcas]
3 Hb_011120_030 0.125856537 - - PREDICTED: uncharacterized protein LOC105638239 [Jatropha curcas]
4 Hb_019733_020 0.1326054272 - - hypothetical protein POPTR_0003s15470g [Populus trichocarpa]
5 Hb_000975_090 0.1356336515 - - Zeamatin precursor, putative [Ricinus communis]
6 Hb_005214_050 0.1465050859 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
7 Hb_170632_010 0.1502730159 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
8 Hb_000373_260 0.1505865018 - - hypothetical protein POPTR_0002s06820g [Populus trichocarpa]
9 Hb_087314_010 0.152198759 - - -
10 Hb_004031_050 0.1523451307 - - sinapyl alcohol dehydrogenase-like protein [Populus tremula x Populus tremuloides]
11 Hb_004970_100 0.152996151 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
12 Hb_029576_070 0.1539891616 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
13 Hb_011355_020 0.1546086226 - - extensin, proline-rich protein, putative [Ricinus communis]
14 Hb_001677_190 0.1611474909 - - ATP-binding cassette transporter, putative [Ricinus communis]
15 Hb_004732_070 0.1646014382 - - conserved hypothetical protein [Ricinus communis]
16 Hb_115445_010 0.1664387001 - - -
17 Hb_007749_020 0.1675716578 - - receptor-kinase, putative [Ricinus communis]
18 Hb_006026_020 0.1691108367 - - PREDICTED: BTB/POZ domain-containing protein At5g48800 [Jatropha curcas]
19 Hb_001675_290 0.1694793643 - - PREDICTED: transcription factor bHLH68-like isoform X1 [Jatropha curcas]
20 Hb_000310_040 0.1695546802 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]

Gene co-expression network

sample Hb_071433_010 Hb_071433_010 Hb_036029_020 Hb_036029_020 Hb_071433_010--Hb_036029_020 Hb_011120_030 Hb_011120_030 Hb_071433_010--Hb_011120_030 Hb_019733_020 Hb_019733_020 Hb_071433_010--Hb_019733_020 Hb_000975_090 Hb_000975_090 Hb_071433_010--Hb_000975_090 Hb_005214_050 Hb_005214_050 Hb_071433_010--Hb_005214_050 Hb_170632_010 Hb_170632_010 Hb_071433_010--Hb_170632_010 Hb_001675_290 Hb_001675_290 Hb_036029_020--Hb_001675_290 Hb_007749_020 Hb_007749_020 Hb_036029_020--Hb_007749_020 Hb_000172_230 Hb_000172_230 Hb_036029_020--Hb_000172_230 Hb_002597_030 Hb_002597_030 Hb_036029_020--Hb_002597_030 Hb_004970_100 Hb_004970_100 Hb_036029_020--Hb_004970_100 Hb_000270_790 Hb_000270_790 Hb_011120_030--Hb_000270_790 Hb_000190_160 Hb_000190_160 Hb_011120_030--Hb_000190_160 Hb_000011_260 Hb_000011_260 Hb_011120_030--Hb_000011_260 Hb_011120_030--Hb_036029_020 Hb_003777_150 Hb_003777_150 Hb_011120_030--Hb_003777_150 Hb_048987_020 Hb_048987_020 Hb_019733_020--Hb_048987_020 Hb_000039_080 Hb_000039_080 Hb_019733_020--Hb_000039_080 Hb_000988_010 Hb_000988_010 Hb_019733_020--Hb_000988_010 Hb_087314_010 Hb_087314_010 Hb_019733_020--Hb_087314_010 Hb_036602_010 Hb_036602_010 Hb_019733_020--Hb_036602_010 Hb_006916_120 Hb_006916_120 Hb_000975_090--Hb_006916_120 Hb_000975_090--Hb_170632_010 Hb_133508_020 Hb_133508_020 Hb_000975_090--Hb_133508_020 Hb_000060_080 Hb_000060_080 Hb_000975_090--Hb_000060_080 Hb_000631_100 Hb_000631_100 Hb_000975_090--Hb_000631_100 Hb_001562_030 Hb_001562_030 Hb_000975_090--Hb_001562_030 Hb_004031_050 Hb_004031_050 Hb_005214_050--Hb_004031_050 Hb_000373_260 Hb_000373_260 Hb_005214_050--Hb_000373_260 Hb_011355_020 Hb_011355_020 Hb_005214_050--Hb_011355_020 Hb_000568_020 Hb_000568_020 Hb_005214_050--Hb_000568_020 Hb_005214_050--Hb_004970_100 Hb_002897_030 Hb_002897_030 Hb_005214_050--Hb_002897_030 Hb_170632_010--Hb_000060_080 Hb_001198_180 Hb_001198_180 Hb_170632_010--Hb_001198_180 Hb_038718_010 Hb_038718_010 Hb_170632_010--Hb_038718_010 Hb_001663_090 Hb_001663_090 Hb_170632_010--Hb_001663_090 Hb_002676_110 Hb_002676_110 Hb_170632_010--Hb_002676_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 29.7863 51.8032 122.589 5.34166 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 11.3539 4.58803

CAGE analysis