Hb_072173_010

Information

Type -
Description -
Location Contig72173: 881-1315
Sequence    

Annotation

kegg
ID cic:CICLE_v10011354mg
description hypothetical protein
nr
ID XP_012092382.1
description PREDICTED: putative cysteine-rich receptor-like protein kinase 34 [Jatropha curcas]
swissprot
ID O65476
description Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=3 SV=2
trembl
ID A0A067JAH9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21287 PE=3 SV=1
Gene Ontology
ID GO:0000166
description cysteine-rich receptor-like protein kinase 35-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_072173_010 0.0 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 34 [Jatropha curcas]
2 Hb_000600_080 0.1000803108 - - -
3 Hb_000101_320 0.1362956195 - - -
4 Hb_000685_140 0.1378093884 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
5 Hb_008834_010 0.1380400146 - - hypothetical protein POPTR_0016s04660g [Populus trichocarpa]
6 Hb_002733_050 0.1380521488 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
7 Hb_114121_010 0.1397889964 - - -
8 Hb_000959_370 0.1402516584 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
9 Hb_008755_020 0.1527392869 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_006013_030 0.1532071153 - - -
11 Hb_001452_090 0.1534108951 - - PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera]
12 Hb_131320_010 0.1535430587 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X2 [Jatropha curcas]
13 Hb_001411_100 0.1545197966 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
14 Hb_008144_010 0.1565424895 - - hypothetical protein VITISV_015004 [Vitis vinifera]
15 Hb_020400_010 0.1595188472 - - PREDICTED: uncharacterized protein LOC105644073 [Jatropha curcas]
16 Hb_168909_010 0.160042892 - - PREDICTED: uncharacterized protein LOC105640156 [Jatropha curcas]
17 Hb_005765_020 0.1710476911 - - -
18 Hb_179183_010 0.1731137455 - - RALF-LIKE 32 family protein [Populus trichocarpa]
19 Hb_000803_230 0.1734690888 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
20 Hb_000346_050 0.1739437957 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_072173_010 Hb_072173_010 Hb_000600_080 Hb_000600_080 Hb_072173_010--Hb_000600_080 Hb_000101_320 Hb_000101_320 Hb_072173_010--Hb_000101_320 Hb_000685_140 Hb_000685_140 Hb_072173_010--Hb_000685_140 Hb_008834_010 Hb_008834_010 Hb_072173_010--Hb_008834_010 Hb_002733_050 Hb_002733_050 Hb_072173_010--Hb_002733_050 Hb_114121_010 Hb_114121_010 Hb_072173_010--Hb_114121_010 Hb_000600_080--Hb_000685_140 Hb_001411_100 Hb_001411_100 Hb_000600_080--Hb_001411_100 Hb_000600_080--Hb_000101_320 Hb_031949_010 Hb_031949_010 Hb_000600_080--Hb_031949_010 Hb_000959_370 Hb_000959_370 Hb_000600_080--Hb_000959_370 Hb_001452_090 Hb_001452_090 Hb_000101_320--Hb_001452_090 Hb_000101_320--Hb_000685_140 Hb_000101_320--Hb_008834_010 Hb_000101_320--Hb_001411_100 Hb_028872_100 Hb_028872_100 Hb_000101_320--Hb_028872_100 Hb_000009_390 Hb_000009_390 Hb_000101_320--Hb_000009_390 Hb_000685_140--Hb_001411_100 Hb_000685_140--Hb_028872_100 Hb_000685_140--Hb_001452_090 Hb_000685_140--Hb_008834_010 Hb_017225_030 Hb_017225_030 Hb_008834_010--Hb_017225_030 Hb_004312_020 Hb_004312_020 Hb_008834_010--Hb_004312_020 Hb_000260_730 Hb_000260_730 Hb_008834_010--Hb_000260_730 Hb_008834_010--Hb_001452_090 Hb_002733_050--Hb_114121_010 Hb_006013_030 Hb_006013_030 Hb_002733_050--Hb_006013_030 Hb_168909_010 Hb_168909_010 Hb_002733_050--Hb_168909_010 Hb_008755_020 Hb_008755_020 Hb_002733_050--Hb_008755_020 Hb_000280_120 Hb_000280_120 Hb_002733_050--Hb_000280_120 Hb_020400_010 Hb_020400_010 Hb_002733_050--Hb_020400_010 Hb_114121_010--Hb_168909_010 Hb_114121_010--Hb_008755_020 Hb_179183_010 Hb_179183_010 Hb_114121_010--Hb_179183_010 Hb_114121_010--Hb_006013_030 Hb_114121_010--Hb_000280_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.796445 0.0562728 0.0980694 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.13162 2.1748

CAGE analysis