Hb_073171_060

Information

Type -
Description -
Location Contig73171: 67954-68935
Sequence    

Annotation

kegg
ID rcu:RCOM_1489450
description Histidine-containing phosphotransfer protein, putative (EC:1.3.1.74)
nr
ID XP_002515965.1
description Histidine-containing phosphotransfer protein, putative [Ricinus communis]
swissprot
ID Q9LU15
description Histidine-containing phosphotransfer protein 4 OS=Arabidopsis thaliana GN=AHP4 PE=1 SV=2
trembl
ID B9RQE6
description Histidine-containing phosphotransfer protein, putative OS=Ricinus communis GN=RCOM_1489450 PE=4 SV=1
Gene Ontology
ID GO:0005622
description histidine-containing phosphotransfer protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073171_060 0.0 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
2 Hb_010272_020 0.0116556968 - - hypothetical protein VITISV_030841 [Vitis vinifera]
3 Hb_000055_100 0.0128416015 - - polyprotein [Oryza australiensis]
4 Hb_000368_130 0.013612582 - - conserved hypothetical protein [Ricinus communis]
5 Hb_088224_010 0.0183307434 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
6 Hb_000245_240 0.0195750834 - - -
7 Hb_000085_110 0.0205128167 - - hypothetical protein JCGZ_00957 [Jatropha curcas]
8 Hb_150498_010 0.0400449465 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
9 Hb_003362_010 0.0555162708 - - Actin-related protein 2/3 complex subunit 4 [Morus notabilis]
10 Hb_004888_050 0.0574018858 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
11 Hb_007586_020 0.0590105907 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
12 Hb_157349_010 0.0831743943 - - PREDICTED: uncharacterized protein LOC102588546 [Solanum tuberosum]
13 Hb_007639_010 0.0902217725 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
14 Hb_001274_010 0.0920612134 - - -
15 Hb_000483_170 0.1162609011 transcription factor TF Family: NAC PREDICTED: protein FEZ [Jatropha curcas]
16 Hb_129358_010 0.1166543974 - - PREDICTED: AT-hook motif nuclear-localized protein 11-like [Jatropha curcas]
17 Hb_000589_430 0.1286009113 - - hypothetical protein JCGZ_01402 [Jatropha curcas]
18 Hb_062858_010 0.1468393255 - - heat-shock protein, putative [Ricinus communis]
19 Hb_046609_010 0.1470043774 - - -
20 Hb_001792_010 0.1515892864 - - Uncharacterized protein TCM_043787 [Theobroma cacao]

Gene co-expression network

sample Hb_073171_060 Hb_073171_060 Hb_010272_020 Hb_010272_020 Hb_073171_060--Hb_010272_020 Hb_000055_100 Hb_000055_100 Hb_073171_060--Hb_000055_100 Hb_000368_130 Hb_000368_130 Hb_073171_060--Hb_000368_130 Hb_088224_010 Hb_088224_010 Hb_073171_060--Hb_088224_010 Hb_000245_240 Hb_000245_240 Hb_073171_060--Hb_000245_240 Hb_000085_110 Hb_000085_110 Hb_073171_060--Hb_000085_110 Hb_010272_020--Hb_000055_100 Hb_010272_020--Hb_000368_130 Hb_150498_010 Hb_150498_010 Hb_010272_020--Hb_150498_010 Hb_010272_020--Hb_088224_010 Hb_010272_020--Hb_000245_240 Hb_000055_100--Hb_000368_130 Hb_000055_100--Hb_088224_010 Hb_000055_100--Hb_000245_240 Hb_000055_100--Hb_000085_110 Hb_000368_130--Hb_088224_010 Hb_000368_130--Hb_000245_240 Hb_000368_130--Hb_000085_110 Hb_088224_010--Hb_000245_240 Hb_088224_010--Hb_000085_110 Hb_000245_240--Hb_000085_110 Hb_000085_110--Hb_010272_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.375344
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.143434 0

CAGE analysis