Hb_073367_010

Information

Type -
Description -
Location Contig73367: 512-1141
Sequence    

Annotation

kegg
ID pop:POPTR_0003s09350g
description Origin recognition complex subunit 2 family protein
nr
ID XP_012074904.1
description PREDICTED: origin of replication complex subunit 2 [Jatropha curcas]
swissprot
ID Q38899
description Origin of replication complex subunit 2 OS=Arabidopsis thaliana GN=ORC2 PE=1 SV=1
trembl
ID A0A067KTL3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09048 PE=4 SV=1
Gene Ontology
ID GO:0000808
description origin recognition complex subunit 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073367_010 0.0 - - PREDICTED: origin of replication complex subunit 2 [Jatropha curcas]
2 Hb_000622_100 0.1017240521 - - PREDICTED: pre-rRNA-processing protein RIX1-like [Jatropha curcas]
3 Hb_000065_080 0.1087403969 - - PREDICTED: omega-6 fatty acid desaturase, chloroplastic-like [Nelumbo nucifera]
4 Hb_004712_180 0.1108152566 - - conserved hypothetical protein [Ricinus communis]
5 Hb_011174_010 0.1124397673 - - hypothetical protein JCGZ_10122 [Jatropha curcas]
6 Hb_003106_130 0.1162977168 - - PREDICTED: uncharacterized protein LOC105640436 [Jatropha curcas]
7 Hb_002235_150 0.1193390219 - - -
8 Hb_002272_260 0.1195556558 - - -
9 Hb_000107_140 0.1212501385 - - -
10 Hb_004117_180 0.1238192684 - - -
11 Hb_004241_040 0.1241956197 - - -
12 Hb_011016_090 0.124915228 - - PREDICTED: 50S ribosomal protein L24, chloroplastic [Populus euphratica]
13 Hb_000101_090 0.1320586551 - - PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Camelina sativa]
14 Hb_007632_250 0.1350481734 - - conserved hypothetical protein [Ricinus communis]
15 Hb_007229_070 0.1369923126 - - PREDICTED: UPF0565 protein C2orf69 [Jatropha curcas]
16 Hb_136731_010 0.1372153522 - - PREDICTED: uncharacterized protein LOC105628378 isoform X4 [Jatropha curcas]
17 Hb_002107_160 0.138415886 - - PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas]
18 Hb_000771_100 0.1395102622 - - Os06g0527300 [Oryza sativa Japonica Group]
19 Hb_000617_320 0.1396976474 - - 40S ribosomal protein S21B [Hevea brasiliensis]
20 Hb_000193_350 0.1403858305 - - eukaryotic translation initiation factor 5A isoform VI [Hevea brasiliensis]

Gene co-expression network

sample Hb_073367_010 Hb_073367_010 Hb_000622_100 Hb_000622_100 Hb_073367_010--Hb_000622_100 Hb_000065_080 Hb_000065_080 Hb_073367_010--Hb_000065_080 Hb_004712_180 Hb_004712_180 Hb_073367_010--Hb_004712_180 Hb_011174_010 Hb_011174_010 Hb_073367_010--Hb_011174_010 Hb_003106_130 Hb_003106_130 Hb_073367_010--Hb_003106_130 Hb_002235_150 Hb_002235_150 Hb_073367_010--Hb_002235_150 Hb_007632_250 Hb_007632_250 Hb_000622_100--Hb_007632_250 Hb_000622_100--Hb_011174_010 Hb_000189_530 Hb_000189_530 Hb_000622_100--Hb_000189_530 Hb_000617_320 Hb_000617_320 Hb_000622_100--Hb_000617_320 Hb_119583_010 Hb_119583_010 Hb_000622_100--Hb_119583_010 Hb_003874_020 Hb_003874_020 Hb_000065_080--Hb_003874_020 Hb_002107_160 Hb_002107_160 Hb_000065_080--Hb_002107_160 Hb_001009_040 Hb_001009_040 Hb_000065_080--Hb_001009_040 Hb_000621_060 Hb_000621_060 Hb_000065_080--Hb_000621_060 Hb_025236_040 Hb_025236_040 Hb_000065_080--Hb_025236_040 Hb_001278_110 Hb_001278_110 Hb_000065_080--Hb_001278_110 Hb_004712_180--Hb_000065_080 Hb_004712_180--Hb_011174_010 Hb_029888_020 Hb_029888_020 Hb_004712_180--Hb_029888_020 Hb_086703_010 Hb_086703_010 Hb_004712_180--Hb_086703_010 Hb_004712_180--Hb_000622_100 Hb_002272_260 Hb_002272_260 Hb_011174_010--Hb_002272_260 Hb_004117_180 Hb_004117_180 Hb_011174_010--Hb_004117_180 Hb_011016_090 Hb_011016_090 Hb_011174_010--Hb_011016_090 Hb_000771_100 Hb_000771_100 Hb_011174_010--Hb_000771_100 Hb_003120_060 Hb_003120_060 Hb_003106_130--Hb_003120_060 Hb_003106_130--Hb_119583_010 Hb_001246_100 Hb_001246_100 Hb_003106_130--Hb_001246_100 Hb_002942_020 Hb_002942_020 Hb_003106_130--Hb_002942_020 Hb_000019_230 Hb_000019_230 Hb_003106_130--Hb_000019_230 Hb_003106_130--Hb_002235_150 Hb_003746_040 Hb_003746_040 Hb_002235_150--Hb_003746_040 Hb_002408_010 Hb_002408_010 Hb_002235_150--Hb_002408_010 Hb_002235_150--Hb_003120_060 Hb_002235_150--Hb_000622_100 Hb_043302_010 Hb_043302_010 Hb_002235_150--Hb_043302_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.1399 6.17865 6.32408 11.0084 23.2814 54.238
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
29.7295 29.6008 5.51895 4.9251 3.2278

CAGE analysis