Hb_073395_010

Information

Type -
Description -
Location Contig73395: 357-1250
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073395_010 0.0 - - -
2 Hb_002234_190 0.1320298095 - - PREDICTED: putative non-specific lipid-transfer protein 14 [Jatropha curcas]
3 Hb_000025_340 0.1498751573 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Jatropha curcas]
4 Hb_002876_290 0.158119206 - - PREDICTED: uncharacterized protein LOC104446353 [Eucalyptus grandis]
5 Hb_001902_190 0.1634168306 - - PREDICTED: oxalate--CoA ligase [Jatropha curcas]
6 Hb_145629_010 0.1700489352 - - -
7 Hb_005143_040 0.1724008401 - - hypothetical protein JCGZ_17315 [Jatropha curcas]
8 Hb_037767_010 0.1745432662 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
9 Hb_002961_060 0.1748679679 - - PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 [Populus euphratica]
10 Hb_001817_160 0.1769322175 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004143_040 0.1786141378 - - argininosuccinate lyase, putative [Ricinus communis]
12 Hb_002272_080 0.1821822647 - - -
13 Hb_032278_030 0.182545152 - - protein phosphatase 2c, putative [Ricinus communis]
14 Hb_001183_010 0.1870099007 - - -
15 Hb_010727_010 0.1870138333 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
16 Hb_012753_130 0.190559446 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002042_130 0.1911519728 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-3 [Jatropha curcas]
18 Hb_006636_010 0.1912823596 - - PREDICTED: uncharacterized protein LOC105637987 [Jatropha curcas]
19 Hb_000302_260 0.1921863392 - - hypothetical protein [Bruguiera gymnorhiza]
20 Hb_001969_080 0.1924299761 - - PREDICTED: uncharacterized protein LOC105634921 [Jatropha curcas]

Gene co-expression network

sample Hb_073395_010 Hb_073395_010 Hb_002234_190 Hb_002234_190 Hb_073395_010--Hb_002234_190 Hb_000025_340 Hb_000025_340 Hb_073395_010--Hb_000025_340 Hb_002876_290 Hb_002876_290 Hb_073395_010--Hb_002876_290 Hb_001902_190 Hb_001902_190 Hb_073395_010--Hb_001902_190 Hb_145629_010 Hb_145629_010 Hb_073395_010--Hb_145629_010 Hb_005143_040 Hb_005143_040 Hb_073395_010--Hb_005143_040 Hb_037767_010 Hb_037767_010 Hb_002234_190--Hb_037767_010 Hb_006502_050 Hb_006502_050 Hb_002234_190--Hb_006502_050 Hb_081745_010 Hb_081745_010 Hb_002234_190--Hb_081745_010 Hb_002234_190--Hb_002876_290 Hb_002234_190--Hb_001902_190 Hb_000592_090 Hb_000592_090 Hb_000025_340--Hb_000592_090 Hb_003498_090 Hb_003498_090 Hb_000025_340--Hb_003498_090 Hb_002272_080 Hb_002272_080 Hb_000025_340--Hb_002272_080 Hb_009838_050 Hb_009838_050 Hb_000025_340--Hb_009838_050 Hb_000530_010 Hb_000530_010 Hb_000025_340--Hb_000530_010 Hb_001817_160 Hb_001817_160 Hb_000025_340--Hb_001817_160 Hb_006588_150 Hb_006588_150 Hb_002876_290--Hb_006588_150 Hb_009476_140 Hb_009476_140 Hb_002876_290--Hb_009476_140 Hb_003211_010 Hb_003211_010 Hb_002876_290--Hb_003211_010 Hb_002876_290--Hb_000025_340 Hb_002876_290--Hb_037767_010 Hb_004230_040 Hb_004230_040 Hb_001902_190--Hb_004230_040 Hb_000227_060 Hb_000227_060 Hb_001902_190--Hb_000227_060 Hb_000451_070 Hb_000451_070 Hb_001902_190--Hb_000451_070 Hb_115241_010 Hb_115241_010 Hb_001902_190--Hb_115241_010 Hb_002961_060 Hb_002961_060 Hb_001902_190--Hb_002961_060 Hb_002042_130 Hb_002042_130 Hb_001902_190--Hb_002042_130 Hb_000481_050 Hb_000481_050 Hb_145629_010--Hb_000481_050 Hb_002344_130 Hb_002344_130 Hb_145629_010--Hb_002344_130 Hb_003938_160 Hb_003938_160 Hb_145629_010--Hb_003938_160 Hb_066913_010 Hb_066913_010 Hb_145629_010--Hb_066913_010 Hb_001135_140 Hb_001135_140 Hb_145629_010--Hb_001135_140 Hb_000363_330 Hb_000363_330 Hb_145629_010--Hb_000363_330 Hb_000023_280 Hb_000023_280 Hb_005143_040--Hb_000023_280 Hb_001215_040 Hb_001215_040 Hb_005143_040--Hb_001215_040 Hb_005914_080 Hb_005914_080 Hb_005143_040--Hb_005914_080 Hb_002391_270 Hb_002391_270 Hb_005143_040--Hb_002391_270 Hb_005054_290 Hb_005054_290 Hb_005143_040--Hb_005054_290 Hb_076693_030 Hb_076693_030 Hb_005143_040--Hb_076693_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.4231 19.0207 1.56239 12.0269 3.01582 14.5793
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.4809 13.3897 6.47599 10.0536 0.894305

CAGE analysis