Hb_073423_010

Information

Type -
Description -
Location Contig73423: 110-625
Sequence    

Annotation

kegg
ID rcu:RCOM_1452220
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID XP_002513041.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RG89
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1452220 PE=4 SV=1
Gene Ontology
ID GO:0016491
description disease resistance family protein lrr family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073423_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_002486_030 0.0094783913 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
3 Hb_008579_010 0.0168750815 - - hypothetical protein JCGZ_01311 [Jatropha curcas]
4 Hb_142691_010 0.0262159707 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
5 Hb_012691_040 0.0290245234 - - PREDICTED: cytochrome P450 81E8-like [Fragaria vesca subsp. vesca]
6 Hb_143232_020 0.0330805343 - - hypothetical protein JCGZ_20467 [Jatropha curcas]
7 Hb_004117_360 0.0408569825 - - hypothetical protein JCGZ_00367 [Jatropha curcas]
8 Hb_001514_110 0.043289595 - - conserved hypothetical protein [Ricinus communis]
9 Hb_104855_020 0.0538960824 - - ankyrin repeat-containing protein, putative [Ricinus communis]
10 Hb_011111_010 0.06148554 - - PREDICTED: putative RING-H2 finger protein ATL21A [Jatropha curcas]
11 Hb_147137_020 0.0660639757 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
12 Hb_001565_050 0.079969175 - - PREDICTED: receptor-like protein kinase 5 [Eucalyptus grandis]
13 Hb_111908_010 0.080847996 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_005725_180 0.0811097454 - - -
15 Hb_001623_020 0.0829306767 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
16 Hb_189242_010 0.0946412999 - - hypothetical protein B456_013G0075002, partial [Gossypium raimondii]
17 Hb_009683_060 0.0961406707 - - -
18 Hb_031862_150 0.0961560874 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
19 Hb_005843_070 0.1035487455 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
20 Hb_117602_010 0.1049870984 - - dimethylaniline monooxygenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_073423_010 Hb_073423_010 Hb_002486_030 Hb_002486_030 Hb_073423_010--Hb_002486_030 Hb_008579_010 Hb_008579_010 Hb_073423_010--Hb_008579_010 Hb_142691_010 Hb_142691_010 Hb_073423_010--Hb_142691_010 Hb_012691_040 Hb_012691_040 Hb_073423_010--Hb_012691_040 Hb_143232_020 Hb_143232_020 Hb_073423_010--Hb_143232_020 Hb_004117_360 Hb_004117_360 Hb_073423_010--Hb_004117_360 Hb_002486_030--Hb_008579_010 Hb_002486_030--Hb_142691_010 Hb_002486_030--Hb_012691_040 Hb_002486_030--Hb_143232_020 Hb_104855_020 Hb_104855_020 Hb_002486_030--Hb_104855_020 Hb_008579_010--Hb_142691_010 Hb_008579_010--Hb_012691_040 Hb_008579_010--Hb_143232_020 Hb_008579_010--Hb_104855_020 Hb_142691_010--Hb_012691_040 Hb_001514_110 Hb_001514_110 Hb_142691_010--Hb_001514_110 Hb_142691_010--Hb_104855_020 Hb_012691_040--Hb_001514_110 Hb_012691_040--Hb_004117_360 Hb_011111_010 Hb_011111_010 Hb_143232_020--Hb_011111_010 Hb_143232_020--Hb_104855_020 Hb_001623_020 Hb_001623_020 Hb_143232_020--Hb_001623_020 Hb_004117_360--Hb_001514_110 Hb_004117_360--Hb_002486_030 Hb_004117_360--Hb_008579_010 Hb_004117_360--Hb_142691_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.76043 0.175987 0.136858 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis