Hb_073490_020

Information

Type -
Description -
Location Contig73490: 1816-3387
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa016333mg
description hypothetical protein
nr
ID XP_007208261.1
description hypothetical protein PRUPE_ppa016333mg, partial [Prunus persica]
swissprot
ID -
description -
trembl
ID M5WRL9
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016333mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073490_020 0.0 - - hypothetical protein PRUPE_ppa016333mg, partial [Prunus persica]
2 Hb_003849_270 0.1801408528 - - -
3 Hb_001823_060 0.1813220755 - - fructose-bisphosphate aldolase, putative [Ricinus communis]
4 Hb_000723_340 0.1846734226 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Jatropha curcas]
5 Hb_000574_460 0.1866758076 - - hypothetical protein JCGZ_06119 [Jatropha curcas]
6 Hb_001252_220 0.2020356125 - - PREDICTED: uncharacterized protein LOC105640647 [Jatropha curcas]
7 Hb_000056_070 0.2055494122 - - -
8 Hb_000270_610 0.2136010412 - - PREDICTED: uncharacterized protein At5g50100, mitochondrial [Jatropha curcas]
9 Hb_007894_050 0.2145678982 - - PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Jatropha curcas]
10 Hb_003349_030 0.2155566516 - - PREDICTED: uncharacterized protein LOC105628283 [Jatropha curcas]
11 Hb_002374_300 0.2168545924 - - hypothetical protein JCGZ_12140 [Jatropha curcas]
12 Hb_006738_020 0.2189616013 - - hypothetical protein VITISV_010510 [Vitis vinifera]
13 Hb_000429_100 0.2201356409 - - hypothetical protein POPTR_0006s05430g [Populus trichocarpa]
14 Hb_000429_090 0.2208167784 - - PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic [Jatropha curcas]
15 Hb_019762_050 0.2209748804 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2-like [Jatropha curcas]
16 Hb_002872_050 0.2217720484 - - PREDICTED: thioredoxin-like 3-2, chloroplastic [Jatropha curcas]
17 Hb_000208_180 0.2222706425 - - PREDICTED: histone H2B-like [Populus euphratica]
18 Hb_000928_130 0.2227827263 - - PREDICTED: protein BOLA4, chloroplastic/mitochondrial [Jatropha curcas]
19 Hb_000877_080 0.2243298559 - - PREDICTED: uncharacterized protein LOC105640901 [Jatropha curcas]
20 Hb_004128_070 0.2250822259 - - PREDICTED: thioredoxin-like protein AAED1, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_073490_020 Hb_073490_020 Hb_003849_270 Hb_003849_270 Hb_073490_020--Hb_003849_270 Hb_001823_060 Hb_001823_060 Hb_073490_020--Hb_001823_060 Hb_000723_340 Hb_000723_340 Hb_073490_020--Hb_000723_340 Hb_000574_460 Hb_000574_460 Hb_073490_020--Hb_000574_460 Hb_001252_220 Hb_001252_220 Hb_073490_020--Hb_001252_220 Hb_000056_070 Hb_000056_070 Hb_073490_020--Hb_000056_070 Hb_000530_120 Hb_000530_120 Hb_003849_270--Hb_000530_120 Hb_000928_130 Hb_000928_130 Hb_003849_270--Hb_000928_130 Hb_003050_280 Hb_003050_280 Hb_003849_270--Hb_003050_280 Hb_006738_030 Hb_006738_030 Hb_003849_270--Hb_006738_030 Hb_000318_160 Hb_000318_160 Hb_003849_270--Hb_000318_160 Hb_003777_040 Hb_003777_040 Hb_003849_270--Hb_003777_040 Hb_001823_060--Hb_000056_070 Hb_003349_030 Hb_003349_030 Hb_001823_060--Hb_003349_030 Hb_019762_050 Hb_019762_050 Hb_001823_060--Hb_019762_050 Hb_000005_300 Hb_000005_300 Hb_001823_060--Hb_000005_300 Hb_017845_010 Hb_017845_010 Hb_001823_060--Hb_017845_010 Hb_001823_060--Hb_001252_220 Hb_000175_190 Hb_000175_190 Hb_000723_340--Hb_000175_190 Hb_027298_030 Hb_027298_030 Hb_000723_340--Hb_027298_030 Hb_002374_300 Hb_002374_300 Hb_000723_340--Hb_002374_300 Hb_007894_050 Hb_007894_050 Hb_000723_340--Hb_007894_050 Hb_003126_130 Hb_003126_130 Hb_000723_340--Hb_003126_130 Hb_003181_060 Hb_003181_060 Hb_000723_340--Hb_003181_060 Hb_001493_120 Hb_001493_120 Hb_000574_460--Hb_001493_120 Hb_001490_030 Hb_001490_030 Hb_000574_460--Hb_001490_030 Hb_091194_010 Hb_091194_010 Hb_000574_460--Hb_091194_010 Hb_006738_020 Hb_006738_020 Hb_000574_460--Hb_006738_020 Hb_000429_090 Hb_000429_090 Hb_000574_460--Hb_000429_090 Hb_002260_010 Hb_002260_010 Hb_001252_220--Hb_002260_010 Hb_012022_140 Hb_012022_140 Hb_001252_220--Hb_012022_140 Hb_004057_010 Hb_004057_010 Hb_001252_220--Hb_004057_010 Hb_024074_010 Hb_024074_010 Hb_001252_220--Hb_024074_010 Hb_001252_220--Hb_000005_300 Hb_003020_150 Hb_003020_150 Hb_001252_220--Hb_003020_150 Hb_002872_050 Hb_002872_050 Hb_000056_070--Hb_002872_050 Hb_001019_150 Hb_001019_150 Hb_000056_070--Hb_001019_150 Hb_003880_030 Hb_003880_030 Hb_000056_070--Hb_003880_030 Hb_003106_100 Hb_003106_100 Hb_000056_070--Hb_003106_100 Hb_001329_150 Hb_001329_150 Hb_000056_070--Hb_001329_150 Hb_000056_070--Hb_003050_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0500086 0.12792 1.43536 0.581864 0 0.381599
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.98181 2.65644 0.788977 0.378019 1.74375

CAGE analysis