Hb_073973_030

Information

Type -
Description -
Location Contig73973: 18045-18266
Sequence    

Annotation

kegg
ID pxb:103941332
description uncharacterized LOC103941332
nr
ID XP_012078191.1
description PREDICTED: uncharacterized protein LOC105638905 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KCQ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12065 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073973_030 0.0 - - PREDICTED: uncharacterized protein LOC105638905 isoform X2 [Jatropha curcas]
2 Hb_016006_010 0.1395853223 - - PREDICTED: choline monooxygenase, chloroplastic isoform X2 [Jatropha curcas]
3 Hb_000099_090 0.1453878247 - - Na(+)/H(+) antiporter, putative [Ricinus communis]
4 Hb_005656_080 0.1628082417 - - PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Jatropha curcas]
5 Hb_000077_120 0.16362209 - - PREDICTED: two pore calcium channel protein 1 [Jatropha curcas]
6 Hb_003581_210 0.1644682515 transcription factor TF Family: Whirly PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic [Jatropha curcas]
7 Hb_011932_010 0.164811293 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
8 Hb_000122_010 0.1700149764 - - amino acid transporter, putative [Ricinus communis]
9 Hb_004725_030 0.1731470901 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X4 [Jatropha curcas]
10 Hb_008725_140 0.1734008163 - - PREDICTED: kynurenine--oxoglutarate transaminase-like isoform X1 [Jatropha curcas]
11 Hb_002600_130 0.1795684105 - - PREDICTED: uncharacterized protein LOC105646808 [Jatropha curcas]
12 Hb_007894_210 0.1807068637 - - PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Jatropha curcas]
13 Hb_000985_040 0.1827675641 transcription factor TF Family: Orphans B-box type zinc finger protein with CCT domain isoform 1 [Theobroma cacao]
14 Hb_002890_150 0.1828023222 - - PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial [Jatropha curcas]
15 Hb_000139_220 0.18312174 - - leucine rich repeat-containing protein, putative [Ricinus communis]
16 Hb_000589_060 0.1839823362 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00699 [Jatropha curcas]
17 Hb_163591_010 0.1873799568 - - PREDICTED: amidase 1-like isoform X2 [Populus euphratica]
18 Hb_000453_040 0.1883412287 - - Triosephosphate isomerase, cytosolic [Gossypium arboreum]
19 Hb_058551_010 0.1885408692 - - PREDICTED: choline monooxygenase, chloroplastic isoform X2 [Jatropha curcas]
20 Hb_000983_120 0.190082847 - - cyclin-dependent protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_073973_030 Hb_073973_030 Hb_016006_010 Hb_016006_010 Hb_073973_030--Hb_016006_010 Hb_000099_090 Hb_000099_090 Hb_073973_030--Hb_000099_090 Hb_005656_080 Hb_005656_080 Hb_073973_030--Hb_005656_080 Hb_000077_120 Hb_000077_120 Hb_073973_030--Hb_000077_120 Hb_003581_210 Hb_003581_210 Hb_073973_030--Hb_003581_210 Hb_011932_010 Hb_011932_010 Hb_073973_030--Hb_011932_010 Hb_016006_010--Hb_000099_090 Hb_016006_010--Hb_011932_010 Hb_001484_100 Hb_001484_100 Hb_016006_010--Hb_001484_100 Hb_000589_060 Hb_000589_060 Hb_016006_010--Hb_000589_060 Hb_000890_010 Hb_000890_010 Hb_016006_010--Hb_000890_010 Hb_027472_210 Hb_027472_210 Hb_000099_090--Hb_027472_210 Hb_002890_150 Hb_002890_150 Hb_000099_090--Hb_002890_150 Hb_000169_190 Hb_000169_190 Hb_000099_090--Hb_000169_190 Hb_000099_090--Hb_000890_010 Hb_003605_050 Hb_003605_050 Hb_005656_080--Hb_003605_050 Hb_000186_330 Hb_000186_330 Hb_005656_080--Hb_000186_330 Hb_004725_030 Hb_004725_030 Hb_005656_080--Hb_004725_030 Hb_000059_200 Hb_000059_200 Hb_005656_080--Hb_000059_200 Hb_005656_080--Hb_000077_120 Hb_000205_130 Hb_000205_130 Hb_005656_080--Hb_000205_130 Hb_002291_060 Hb_002291_060 Hb_000077_120--Hb_002291_060 Hb_044155_010 Hb_044155_010 Hb_000077_120--Hb_044155_010 Hb_000077_120--Hb_002890_150 Hb_013405_150 Hb_013405_150 Hb_000077_120--Hb_013405_150 Hb_000139_220 Hb_000139_220 Hb_000077_120--Hb_000139_220 Hb_000077_120--Hb_000890_010 Hb_011249_030 Hb_011249_030 Hb_003581_210--Hb_011249_030 Hb_000983_120 Hb_000983_120 Hb_003581_210--Hb_000983_120 Hb_002255_040 Hb_002255_040 Hb_003581_210--Hb_002255_040 Hb_028207_020 Hb_028207_020 Hb_003581_210--Hb_028207_020 Hb_039605_010 Hb_039605_010 Hb_003581_210--Hb_039605_010 Hb_004128_200 Hb_004128_200 Hb_003581_210--Hb_004128_200 Hb_000179_180 Hb_000179_180 Hb_011932_010--Hb_000179_180 Hb_011932_010--Hb_000589_060 Hb_011932_010--Hb_001484_100 Hb_011932_010--Hb_005656_080 Hb_011932_010--Hb_000205_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.33574 12.1923 30.3909 7.80484 8.39487 17.0184
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.78439 4.5446 0.883155 2.84797 2.7905

CAGE analysis