Hb_073973_150

Information

Type -
Description -
Location Contig73973: 120500-125879
Sequence    

Annotation

kegg
ID pop:POPTR_0002s08590g
description hypothetical protein
nr
ID XP_012078204.1
description PREDICTED: aminoacylase-1 isoform X1 [Jatropha curcas]
swissprot
ID P37111
description Aminoacylase-1 OS=Sus scrofa GN=ACY1 PE=1 SV=2
trembl
ID A0A067K9L6
description Aminoacylase-1 OS=Jatropha curcas GN=JCGZ_12074 PE=3 SV=1
Gene Ontology
ID GO:0005783
description aminoacylase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56340: 121312-125510 , PASA_asmbl_56342: 123525-123916 , PASA_asmbl_56343: 125698-125845
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073973_150 0.0 - - PREDICTED: aminoacylase-1 isoform X1 [Jatropha curcas]
2 Hb_000640_070 0.0566093341 - - PREDICTED: vacuolar protein sorting-associated protein 51 homolog [Jatropha curcas]
3 Hb_001194_020 0.0629693934 - - microtubule associated protein xmap215, putative [Ricinus communis]
4 Hb_008397_010 0.0676281018 - - PREDICTED: uncharacterized protein LOC105640192 isoform X2 [Jatropha curcas]
5 Hb_000284_230 0.0680983514 - - PREDICTED: uncharacterized protein At5g49945-like [Jatropha curcas]
6 Hb_003104_040 0.0696850894 - - PREDICTED: insulin-degrading enzyme isoform X1 [Jatropha curcas]
7 Hb_002475_040 0.0711520405 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Jatropha curcas]
8 Hb_001153_050 0.073047579 - - PREDICTED: protein FIZZY-RELATED 2 [Jatropha curcas]
9 Hb_002784_030 0.0757899148 - - hypothetical protein POPTR_0001s06740g [Populus trichocarpa]
10 Hb_010272_010 0.0759748569 - - PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Jatropha curcas]
11 Hb_002014_040 0.0857125631 - - site-1 protease, putative [Ricinus communis]
12 Hb_002539_110 0.0862927421 - - hypothetical protein JCGZ_15697 [Jatropha curcas]
13 Hb_006355_020 0.0869665955 - - PREDICTED: CLIP-associated protein [Jatropha curcas]
14 Hb_000820_150 0.0873972865 - - PREDICTED: ACT domain-containing protein ACR9-like [Jatropha curcas]
15 Hb_012215_010 0.08883633 - - PREDICTED: YTH domain-containing family protein 1 [Populus euphratica]
16 Hb_000261_100 0.091252967 - - PREDICTED: beta-galactosidase 9 isoform X2 [Jatropha curcas]
17 Hb_162275_040 0.0926332882 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005895_010 0.0941227448 - - PREDICTED: uncharacterized protein LOC105643387 isoform X1 [Jatropha curcas]
19 Hb_007800_020 0.0942720064 - - PREDICTED: probable arabinosyltransferase ARAD1 isoform X1 [Jatropha curcas]
20 Hb_015026_100 0.0948571629 - - PREDICTED: transmembrane protein 184C-like [Jatropha curcas]

Gene co-expression network

sample Hb_073973_150 Hb_073973_150 Hb_000640_070 Hb_000640_070 Hb_073973_150--Hb_000640_070 Hb_001194_020 Hb_001194_020 Hb_073973_150--Hb_001194_020 Hb_008397_010 Hb_008397_010 Hb_073973_150--Hb_008397_010 Hb_000284_230 Hb_000284_230 Hb_073973_150--Hb_000284_230 Hb_003104_040 Hb_003104_040 Hb_073973_150--Hb_003104_040 Hb_002475_040 Hb_002475_040 Hb_073973_150--Hb_002475_040 Hb_012215_010 Hb_012215_010 Hb_000640_070--Hb_012215_010 Hb_000640_070--Hb_008397_010 Hb_002784_030 Hb_002784_030 Hb_000640_070--Hb_002784_030 Hb_010272_010 Hb_010272_010 Hb_000640_070--Hb_010272_010 Hb_000640_070--Hb_001194_020 Hb_001194_020--Hb_008397_010 Hb_001194_020--Hb_000284_230 Hb_006355_020 Hb_006355_020 Hb_001194_020--Hb_006355_020 Hb_001059_130 Hb_001059_130 Hb_001194_020--Hb_001059_130 Hb_000336_020 Hb_000336_020 Hb_008397_010--Hb_000336_020 Hb_008397_010--Hb_000284_230 Hb_007894_160 Hb_007894_160 Hb_008397_010--Hb_007894_160 Hb_000284_230--Hb_002475_040 Hb_000358_100 Hb_000358_100 Hb_000284_230--Hb_000358_100 Hb_000284_230--Hb_006355_020 Hb_003104_040--Hb_012215_010 Hb_005053_010 Hb_005053_010 Hb_003104_040--Hb_005053_010 Hb_003104_040--Hb_010272_010 Hb_003104_040--Hb_000640_070 Hb_002539_110 Hb_002539_110 Hb_003104_040--Hb_002539_110 Hb_004064_050 Hb_004064_050 Hb_002475_040--Hb_004064_050 Hb_158092_080 Hb_158092_080 Hb_002475_040--Hb_158092_080 Hb_003124_160 Hb_003124_160 Hb_002475_040--Hb_003124_160 Hb_012055_110 Hb_012055_110 Hb_002475_040--Hb_012055_110 Hb_001935_160 Hb_001935_160 Hb_002475_040--Hb_001935_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.237 10.4998 13.9484 16.0615 15.6682 11.1295
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.64602 3.29393 3.94851 11.8555 14.3396

CAGE analysis