Hb_074152_010

Information

Type -
Description -
Location Contig74152: 432-1073
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074152_010 0.0 - - -
2 Hb_000917_250 0.1159390359 - - PREDICTED: coiled-coil domain-containing protein 130-like [Populus euphratica]
3 Hb_000236_270 0.2361899216 - - ATP-binding cassette transporter, putative [Ricinus communis]
4 Hb_001773_020 0.2408750456 - - hypothetical protein POPTR_0016s00980g [Populus trichocarpa]
5 Hb_006045_060 0.2418474075 - - PREDICTED: uncharacterized protein LOC104222982, partial [Nicotiana sylvestris]
6 Hb_000721_020 0.2458219347 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
7 Hb_000326_020 0.2679886609 - - -
8 Hb_002701_130 0.3062538189 transcription factor TF Family: MYB Myb domain protein 121 [Theobroma cacao]
9 Hb_011515_030 0.3076440257 - - -
10 Hb_149731_010 0.3170815028 - - -
11 Hb_005116_020 0.3188940137 - - PREDICTED: DNA repair helicase UVH6 isoform X2 [Sesamum indicum]
12 Hb_080083_010 0.3258891505 - - -
13 Hb_002983_100 0.3300126322 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF084 [Jatropha curcas]
14 Hb_004092_010 0.3313801323 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
15 Hb_000976_180 0.3317132517 - - PREDICTED: uncharacterized protein LOC102592049 [Solanum tuberosum]
16 Hb_141838_010 0.3364604916 - - -
17 Hb_001125_030 0.3379307938 - - conserved hypothetical protein [Ricinus communis]
18 Hb_059126_010 0.3404691531 - - -
19 Hb_007189_020 0.3409280284 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
20 Hb_000563_220 0.3433471526 - - hypothetical protein VITISV_004111 [Vitis vinifera]

Gene co-expression network

sample Hb_074152_010 Hb_074152_010 Hb_000917_250 Hb_000917_250 Hb_074152_010--Hb_000917_250 Hb_000236_270 Hb_000236_270 Hb_074152_010--Hb_000236_270 Hb_001773_020 Hb_001773_020 Hb_074152_010--Hb_001773_020 Hb_006045_060 Hb_006045_060 Hb_074152_010--Hb_006045_060 Hb_000721_020 Hb_000721_020 Hb_074152_010--Hb_000721_020 Hb_000326_020 Hb_000326_020 Hb_074152_010--Hb_000326_020 Hb_000917_250--Hb_001773_020 Hb_007189_020 Hb_007189_020 Hb_000917_250--Hb_007189_020 Hb_000917_250--Hb_000326_020 Hb_000917_250--Hb_006045_060 Hb_000917_250--Hb_000236_270 Hb_005116_020 Hb_005116_020 Hb_000236_270--Hb_005116_020 Hb_013983_010 Hb_013983_010 Hb_000236_270--Hb_013983_010 Hb_010603_030 Hb_010603_030 Hb_000236_270--Hb_010603_030 Hb_029866_010 Hb_029866_010 Hb_000236_270--Hb_029866_010 Hb_000038_150 Hb_000038_150 Hb_000236_270--Hb_000038_150 Hb_001769_020 Hb_001769_020 Hb_001773_020--Hb_001769_020 Hb_080083_010 Hb_080083_010 Hb_001773_020--Hb_080083_010 Hb_002701_130 Hb_002701_130 Hb_001773_020--Hb_002701_130 Hb_011515_030 Hb_011515_030 Hb_001773_020--Hb_011515_030 Hb_006045_060--Hb_000721_020 Hb_006045_060--Hb_000326_020 Hb_032533_010 Hb_032533_010 Hb_006045_060--Hb_032533_010 Hb_003687_180 Hb_003687_180 Hb_006045_060--Hb_003687_180 Hb_000721_020--Hb_000326_020 Hb_000721_020--Hb_032533_010 Hb_000721_020--Hb_003687_180 Hb_000721_020--Hb_000917_250 Hb_000326_020--Hb_032533_010 Hb_000326_020--Hb_003687_180 Hb_001541_240 Hb_001541_240 Hb_000326_020--Hb_001541_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.157543 0 0 0 0.429827 0.0770348
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.176159 0 0 0

CAGE analysis