Hb_074197_050

Information

Type -
Description -
Location Contig74197: 70049-71664
Sequence    

Annotation

kegg
ID pop:POPTR_0003s11530g
description POPTRDRAFT_554246; hypothetical protein
nr
ID XP_012087095.1
description PREDICTED: uncharacterized protein LOC105645952 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JNX6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20748 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074197_050 0.0 - - PREDICTED: uncharacterized protein LOC105645952 [Jatropha curcas]
2 Hb_061700_040 0.1000826725 desease resistance Gene Name: NB-ARC hypothetical protein POPTR_0013s00890g [Populus trichocarpa]
3 Hb_000084_210 0.1273687832 - - hypothetical protein POPTR_0016s08050g [Populus trichocarpa]
4 Hb_027380_070 0.1276374754 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000107_580 0.1314538516 - - PREDICTED: delta(24)-sterol reductase [Jatropha curcas]
6 Hb_005365_040 0.1324259698 - - hypothetical protein JCGZ_15100 [Jatropha curcas]
7 Hb_048141_050 0.132746275 - - hypothetical protein PRUPE_ppa009153mg [Prunus persica]
8 Hb_002499_050 0.1328916701 - - receptor protein kinase, putative [Ricinus communis]
9 Hb_001369_590 0.1350613448 transcription factor TF Family: MYB hypothetical protein POPTR_0015s14600g [Populus trichocarpa]
10 Hb_002561_040 0.1386660805 - - Photosynthetic electron transfer C [Theobroma cacao]
11 Hb_000431_080 0.1420973503 - - PREDICTED: uncharacterized protein LOC105632547 [Jatropha curcas]
12 Hb_000087_040 0.1438675971 - - Autoinhibited Ca(2+)-ATPase 10 isoform 1 [Theobroma cacao]
13 Hb_000282_020 0.1465237714 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
14 Hb_000152_650 0.1467516882 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
15 Hb_046590_010 0.1470833426 - - Cycloeucalenol cycloisomerase, putative [Ricinus communis]
16 Hb_004346_050 0.1479646818 - - PREDICTED: ABC transporter G family member 22 [Jatropha curcas]
17 Hb_000172_660 0.1489525817 - - flavonoid 3-hydroxylase, putative [Ricinus communis]
18 Hb_022167_010 0.149234689 - - Kinase, putative isoform 2 [Theobroma cacao]
19 Hb_004411_010 0.1493938955 - - PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X5 [Gossypium raimondii]
20 Hb_006620_030 0.1506801778 - - nitrate reductase, putative [Ricinus communis]

Gene co-expression network

sample Hb_074197_050 Hb_074197_050 Hb_061700_040 Hb_061700_040 Hb_074197_050--Hb_061700_040 Hb_000084_210 Hb_000084_210 Hb_074197_050--Hb_000084_210 Hb_027380_070 Hb_027380_070 Hb_074197_050--Hb_027380_070 Hb_000107_580 Hb_000107_580 Hb_074197_050--Hb_000107_580 Hb_005365_040 Hb_005365_040 Hb_074197_050--Hb_005365_040 Hb_048141_050 Hb_048141_050 Hb_074197_050--Hb_048141_050 Hb_004346_050 Hb_004346_050 Hb_061700_040--Hb_004346_050 Hb_061700_040--Hb_048141_050 Hb_000087_040 Hb_000087_040 Hb_061700_040--Hb_000087_040 Hb_016371_010 Hb_016371_010 Hb_061700_040--Hb_016371_010 Hb_179129_010 Hb_179129_010 Hb_061700_040--Hb_179129_010 Hb_002561_040 Hb_002561_040 Hb_000084_210--Hb_002561_040 Hb_002499_050 Hb_002499_050 Hb_000084_210--Hb_002499_050 Hb_004627_050 Hb_004627_050 Hb_000084_210--Hb_004627_050 Hb_001369_590 Hb_001369_590 Hb_000084_210--Hb_001369_590 Hb_002259_020 Hb_002259_020 Hb_000084_210--Hb_002259_020 Hb_011512_100 Hb_011512_100 Hb_000084_210--Hb_011512_100 Hb_030565_020 Hb_030565_020 Hb_027380_070--Hb_030565_020 Hb_027380_070--Hb_011512_100 Hb_002253_020 Hb_002253_020 Hb_027380_070--Hb_002253_020 Hb_027380_070--Hb_002259_020 Hb_011716_140 Hb_011716_140 Hb_027380_070--Hb_011716_140 Hb_027380_070--Hb_004627_050 Hb_003050_140 Hb_003050_140 Hb_000107_580--Hb_003050_140 Hb_000152_650 Hb_000152_650 Hb_000107_580--Hb_000152_650 Hb_000107_580--Hb_001369_590 Hb_105148_020 Hb_105148_020 Hb_000107_580--Hb_105148_020 Hb_001357_160 Hb_001357_160 Hb_000107_580--Hb_001357_160 Hb_074240_030 Hb_074240_030 Hb_000107_580--Hb_074240_030 Hb_005365_040--Hb_001369_590 Hb_000051_150 Hb_000051_150 Hb_005365_040--Hb_000051_150 Hb_000187_100 Hb_000187_100 Hb_005365_040--Hb_000187_100 Hb_000160_260 Hb_000160_260 Hb_005365_040--Hb_000160_260 Hb_002121_030 Hb_002121_030 Hb_005365_040--Hb_002121_030 Hb_005365_040--Hb_000084_210 Hb_048141_050--Hb_004346_050 Hb_048141_050--Hb_016371_010 Hb_048141_050--Hb_179129_010 Hb_004411_010 Hb_004411_010 Hb_048141_050--Hb_004411_010 Hb_078954_030 Hb_078954_030 Hb_048141_050--Hb_078954_030 Hb_048141_050--Hb_000087_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0815745 1.15086 0.224634 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0473536 0 0.474518

CAGE analysis