Hb_074449_010

Information

Type -
Description -
Location Contig74449: 94-792
Sequence    

Annotation

kegg
ID pop:POPTR_0005s04330g
description hypothetical protein
nr
ID XP_012089461.1
description PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JVM2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23412 PE=4 SV=1
Gene Ontology
ID GO:0032550
description disease resistance protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074449_010 0.0 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
2 Hb_001488_340 0.1302034188 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
3 Hb_002804_020 0.1384260096 - - epsin N-terminal homology domain-containing family protein [Populus trichocarpa]
4 Hb_161478_010 0.1401496695 - - ABC transporter family protein [Hevea brasiliensis]
5 Hb_010883_140 0.1424153941 - - PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Jatropha curcas]
6 Hb_002541_020 0.1465583932 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
7 Hb_000270_870 0.1489746188 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]
8 Hb_010942_020 0.1541670618 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003688_090 0.1570971525 - - PREDICTED: ATP synthase subunit gamma, mitochondrial [Jatropha curcas]
10 Hb_001141_410 0.1592991122 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
11 Hb_000261_330 0.1621550247 - - PREDICTED: ER lumen protein-retaining receptor [Amborella trichopoda]
12 Hb_169631_010 0.1659016415 - - MADS-box transcription factor, putative [Ricinus communis]
13 Hb_003669_010 0.166307852 - - PREDICTED: psbP domain-containing protein 5, chloroplastic [Populus euphratica]
14 Hb_165279_010 0.1666162455 - - Kiwellin, putative [Ricinus communis]
15 Hb_007951_040 0.168613599 - - signal peptidase family protein [Populus trichocarpa]
16 Hb_045770_010 0.1710634209 - - ER lumen protein retaining receptor [Populus trichocarpa]
17 Hb_000022_200 0.1721072607 - - PREDICTED: uncharacterized protein LOC105638292 [Jatropha curcas]
18 Hb_001085_260 0.1731780419 - - PREDICTED: uncharacterized protein LOC105633184 [Jatropha curcas]
19 Hb_000494_080 0.175033431 - - Palmitoyl-protein thioesterase 1 precursor, putative [Ricinus communis]
20 Hb_003582_080 0.1756744763 - - iaa-alanine resistance protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_074449_010 Hb_074449_010 Hb_001488_340 Hb_001488_340 Hb_074449_010--Hb_001488_340 Hb_002804_020 Hb_002804_020 Hb_074449_010--Hb_002804_020 Hb_161478_010 Hb_161478_010 Hb_074449_010--Hb_161478_010 Hb_010883_140 Hb_010883_140 Hb_074449_010--Hb_010883_140 Hb_002541_020 Hb_002541_020 Hb_074449_010--Hb_002541_020 Hb_000270_870 Hb_000270_870 Hb_074449_010--Hb_000270_870 Hb_005085_020 Hb_005085_020 Hb_001488_340--Hb_005085_020 Hb_001882_040 Hb_001882_040 Hb_001488_340--Hb_001882_040 Hb_001488_340--Hb_000270_870 Hb_001141_410 Hb_001141_410 Hb_001488_340--Hb_001141_410 Hb_000198_070 Hb_000198_070 Hb_001488_340--Hb_000198_070 Hb_000733_050 Hb_000733_050 Hb_002804_020--Hb_000733_050 Hb_002804_020--Hb_002541_020 Hb_029866_100 Hb_029866_100 Hb_002804_020--Hb_029866_100 Hb_002804_020--Hb_000270_870 Hb_000413_070 Hb_000413_070 Hb_002804_020--Hb_000413_070 Hb_162040_010 Hb_162040_010 Hb_161478_010--Hb_162040_010 Hb_001085_260 Hb_001085_260 Hb_161478_010--Hb_001085_260 Hb_002485_030 Hb_002485_030 Hb_161478_010--Hb_002485_030 Hb_007951_040 Hb_007951_040 Hb_161478_010--Hb_007951_040 Hb_007477_030 Hb_007477_030 Hb_161478_010--Hb_007477_030 Hb_010883_140--Hb_002541_020 Hb_003669_010 Hb_003669_010 Hb_010883_140--Hb_003669_010 Hb_002818_050 Hb_002818_050 Hb_010883_140--Hb_002818_050 Hb_010655_020 Hb_010655_020 Hb_010883_140--Hb_010655_020 Hb_000074_100 Hb_000074_100 Hb_010883_140--Hb_000074_100 Hb_002541_020--Hb_000413_070 Hb_000120_550 Hb_000120_550 Hb_002541_020--Hb_000120_550 Hb_165279_010 Hb_165279_010 Hb_002541_020--Hb_165279_010 Hb_002541_020--Hb_002818_050 Hb_003872_010 Hb_003872_010 Hb_000270_870--Hb_003872_010 Hb_001776_030 Hb_001776_030 Hb_000270_870--Hb_001776_030 Hb_008511_060 Hb_008511_060 Hb_000270_870--Hb_008511_060 Hb_010053_040 Hb_010053_040 Hb_000270_870--Hb_010053_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
40.2275 8.01251 37.6707 46.5073 11.984 38.3624
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.6904 10.1155 2.82616 11.2863 16.2831

CAGE analysis