Hb_074672_010

Information

Type -
Description -
Location Contig74672: 98-496
Sequence    

Annotation

kegg
ID rcu:RCOM_1579690
description receptor serine/threonine kinase, putative (EC:2.7.10.2)
nr
ID XP_002513562.1
description receptor serine/threonine kinase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RIJ3
description Receptor serine/threonine kinase, putative OS=Ricinus communis GN=RCOM_1579690 PE=3 SV=1
Gene Ontology
ID GO:0004672
description glycerophosphodiester phosphodiesterase protein kinase domain-containing gdpdl2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074672_010 0.0 - - receptor serine/threonine kinase, putative [Ricinus communis]
2 Hb_120011_010 0.0852620389 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
3 Hb_077694_010 0.1052239535 - - uncharacterized protein LOC100305624 [Glycine max]
4 Hb_006615_060 0.1088443846 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000959_240 0.1188297336 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
6 Hb_017693_040 0.1209252897 - - tyrosine kinase family protein [Medicago truncatula]
7 Hb_001619_140 0.1218920267 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
8 Hb_001405_250 0.1235667859 - - PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
9 Hb_086614_010 0.127192076 transcription factor TF Family: Orphans PREDICTED: zinc finger protein HD1-like isoform X1 [Jatropha curcas]
10 Hb_002391_020 0.1296931503 transcription factor TF Family: NAC PREDICTED: putative NAC domain-containing protein 94 [Jatropha curcas]
11 Hb_001361_010 0.1309785717 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
12 Hb_008202_020 0.1318733839 - - receptor serine/threonine kinase, putative [Ricinus communis]
13 Hb_012022_020 0.1328266178 transcription factor TF Family: G2-like hypothetical protein POPTR_0006s10190g [Populus trichocarpa]
14 Hb_002010_020 0.1341400792 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Jatropha curcas]
15 Hb_032071_010 0.1359671854 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
16 Hb_001153_250 0.1369265132 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1A-like [Jatropha curcas]
17 Hb_001846_030 0.1375810651 - - PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
18 Hb_001310_010 0.1399354816 - - PREDICTED: calcium-transporting ATPase 2, plasma membrane-type [Jatropha curcas]
19 Hb_167186_010 0.1409235266 - - cation-transporting atpase plant, putative [Ricinus communis]
20 Hb_000025_490 0.1430715965 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]

Gene co-expression network

sample Hb_074672_010 Hb_074672_010 Hb_120011_010 Hb_120011_010 Hb_074672_010--Hb_120011_010 Hb_077694_010 Hb_077694_010 Hb_074672_010--Hb_077694_010 Hb_006615_060 Hb_006615_060 Hb_074672_010--Hb_006615_060 Hb_000959_240 Hb_000959_240 Hb_074672_010--Hb_000959_240 Hb_017693_040 Hb_017693_040 Hb_074672_010--Hb_017693_040 Hb_001619_140 Hb_001619_140 Hb_074672_010--Hb_001619_140 Hb_120011_010--Hb_001619_140 Hb_001310_010 Hb_001310_010 Hb_120011_010--Hb_001310_010 Hb_120011_010--Hb_077694_010 Hb_008202_020 Hb_008202_020 Hb_120011_010--Hb_008202_020 Hb_120011_010--Hb_006615_060 Hb_121540_010 Hb_121540_010 Hb_077694_010--Hb_121540_010 Hb_077694_010--Hb_017693_040 Hb_005381_010 Hb_005381_010 Hb_077694_010--Hb_005381_010 Hb_000069_530 Hb_000069_530 Hb_077694_010--Hb_000069_530 Hb_001660_080 Hb_001660_080 Hb_077694_010--Hb_001660_080 Hb_164146_020 Hb_164146_020 Hb_006615_060--Hb_164146_020 Hb_001153_250 Hb_001153_250 Hb_006615_060--Hb_001153_250 Hb_006615_060--Hb_005381_010 Hb_006615_060--Hb_077694_010 Hb_008725_220 Hb_008725_220 Hb_000959_240--Hb_008725_220 Hb_007858_020 Hb_007858_020 Hb_000959_240--Hb_007858_020 Hb_005054_330 Hb_005054_330 Hb_000959_240--Hb_005054_330 Hb_167186_010 Hb_167186_010 Hb_000959_240--Hb_167186_010 Hb_101437_010 Hb_101437_010 Hb_000959_240--Hb_101437_010 Hb_000025_490 Hb_000025_490 Hb_000959_240--Hb_000025_490 Hb_017693_040--Hb_121540_010 Hb_000087_200 Hb_000087_200 Hb_017693_040--Hb_000087_200 Hb_001635_230 Hb_001635_230 Hb_017693_040--Hb_001635_230 Hb_000359_260 Hb_000359_260 Hb_017693_040--Hb_000359_260 Hb_012022_020 Hb_012022_020 Hb_017693_040--Hb_012022_020 Hb_001619_140--Hb_008202_020 Hb_154466_010 Hb_154466_010 Hb_001619_140--Hb_154466_010 Hb_000571_030 Hb_000571_030 Hb_001619_140--Hb_000571_030 Hb_004899_360 Hb_004899_360 Hb_001619_140--Hb_004899_360 Hb_001619_140--Hb_007858_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 23.1911 22.5059 3.0021 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.28109 1.10481

CAGE analysis