Hb_074715_010

Information

Type -
Description -
Location Contig74715: 52-768
Sequence    

Annotation

kegg
ID rcu:RCOM_1045150
description TMV resistance protein N, putative
nr
ID XP_012065766.1
description PREDICTED: disease resistance protein RPS6-like isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LFQ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25445 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074715_010 0.0 - - PREDICTED: disease resistance protein RPS6-like isoform X2 [Jatropha curcas]
2 Hb_005269_040 0.0864122935 - - PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g06270 [Jatropha curcas]
3 Hb_005048_130 0.0891054581 - - hypothetical protein POPTR_0004s03700g [Populus trichocarpa]
4 Hb_002662_020 0.0921724926 - - PREDICTED: F-box protein At1g47056-like [Jatropha curcas]
5 Hb_001377_270 0.1022680495 - - hypothetical protein CICLE_v10021159mg [Citrus clementina]
6 Hb_004143_040 0.1027029721 - - argininosuccinate lyase, putative [Ricinus communis]
7 Hb_028962_020 0.1063047366 - - hypothetical protein POPTR_0016s00660g [Populus trichocarpa]
8 Hb_170487_020 0.108142545 - - hypothetical protein JCGZ_17178 [Jatropha curcas]
9 Hb_000025_180 0.1087431709 - - hypothetical protein CISIN_1g024241mg [Citrus sinensis]
10 Hb_000530_010 0.1105127342 - - PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Jatropha curcas]
11 Hb_028285_010 0.11274613 - - PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Jatropha curcas]
12 Hb_000357_110 0.1130968096 - - PREDICTED: uncharacterized protein LOC105643970 isoform X2 [Jatropha curcas]
13 Hb_000116_410 0.1139320272 - - hypothetical protein JCGZ_22416 [Jatropha curcas]
14 Hb_002961_060 0.1150602448 - - PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 [Populus euphratica]
15 Hb_000982_060 0.115953571 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
16 Hb_144528_010 0.1167251277 - - type II inositol 5-phosphatase, putative [Ricinus communis]
17 Hb_000023_280 0.1169619963 - - hypothetical protein POPTR_0006s28210g [Populus trichocarpa]
18 Hb_004310_020 0.1173498273 - - PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Jatropha curcas]
19 Hb_000670_050 0.1181819615 transcription factor TF Family: MYB hypothetical protein JCGZ_16088 [Jatropha curcas]
20 Hb_000028_370 0.1188771439 - - Guanine nucleotide-binding protein alpha-2 subunit [Glycine soja]

Gene co-expression network

sample Hb_074715_010 Hb_074715_010 Hb_005269_040 Hb_005269_040 Hb_074715_010--Hb_005269_040 Hb_005048_130 Hb_005048_130 Hb_074715_010--Hb_005048_130 Hb_002662_020 Hb_002662_020 Hb_074715_010--Hb_002662_020 Hb_001377_270 Hb_001377_270 Hb_074715_010--Hb_001377_270 Hb_004143_040 Hb_004143_040 Hb_074715_010--Hb_004143_040 Hb_028962_020 Hb_028962_020 Hb_074715_010--Hb_028962_020 Hb_144528_010 Hb_144528_010 Hb_005269_040--Hb_144528_010 Hb_005269_040--Hb_001377_270 Hb_001538_130 Hb_001538_130 Hb_005269_040--Hb_001538_130 Hb_005269_040--Hb_002662_020 Hb_000192_080 Hb_000192_080 Hb_005269_040--Hb_000192_080 Hb_028285_010 Hb_028285_010 Hb_005048_130--Hb_028285_010 Hb_000062_070 Hb_000062_070 Hb_005048_130--Hb_000062_070 Hb_112798_020 Hb_112798_020 Hb_005048_130--Hb_112798_020 Hb_001408_040 Hb_001408_040 Hb_005048_130--Hb_001408_040 Hb_010997_080 Hb_010997_080 Hb_005048_130--Hb_010997_080 Hb_000530_010 Hb_000530_010 Hb_005048_130--Hb_000530_010 Hb_032808_030 Hb_032808_030 Hb_002662_020--Hb_032808_030 Hb_002662_020--Hb_004143_040 Hb_000116_410 Hb_000116_410 Hb_002662_020--Hb_000116_410 Hb_002026_210 Hb_002026_210 Hb_002662_020--Hb_002026_210 Hb_000347_180 Hb_000347_180 Hb_002662_020--Hb_000347_180 Hb_000080_150 Hb_000080_150 Hb_001377_270--Hb_000080_150 Hb_001377_270--Hb_001538_130 Hb_001377_270--Hb_000347_180 Hb_000608_320 Hb_000608_320 Hb_001377_270--Hb_000608_320 Hb_000366_120 Hb_000366_120 Hb_001377_270--Hb_000366_120 Hb_000023_280 Hb_000023_280 Hb_004143_040--Hb_000023_280 Hb_004143_040--Hb_000116_410 Hb_003373_030 Hb_003373_030 Hb_004143_040--Hb_003373_030 Hb_003761_010 Hb_003761_010 Hb_004143_040--Hb_003761_010 Hb_001205_240 Hb_001205_240 Hb_004143_040--Hb_001205_240 Hb_000679_310 Hb_000679_310 Hb_028962_020--Hb_000679_310 Hb_002028_210 Hb_002028_210 Hb_028962_020--Hb_002028_210 Hb_028962_020--Hb_001408_040 Hb_002205_110 Hb_002205_110 Hb_028962_020--Hb_002205_110 Hb_005653_090 Hb_005653_090 Hb_028962_020--Hb_005653_090 Hb_000886_050 Hb_000886_050 Hb_028962_020--Hb_000886_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.31291 10.8969 3.13615 15.2751 7.59182 9.28002
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.01355 9.56921 6.13228 8.36202 3.31292

CAGE analysis