Hb_075265_010

Information

Type -
Description -
Location Contig75265: 9-811
Sequence    

Annotation

kegg
ID pop:POPTR_0017s01950g
description hypothetical protein
nr
ID KDP43125.1
description hypothetical protein JCGZ_26658 [Jatropha curcas]
swissprot
ID Q7XA40
description Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2
trembl
ID A0A067LF36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_075265_010 0.0 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
2 Hb_011909_120 0.1796266322 - - Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
3 Hb_048898_010 0.1888842564 - - PREDICTED: uncharacterized protein LOC105116251 isoform X2 [Populus euphratica]
4 Hb_001322_040 0.1899039745 - - -
5 Hb_001799_110 0.1938997787 - - PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial isoform X2 [Jatropha curcas]
6 Hb_003206_120 0.1955316255 - - PREDICTED: glutamate decarboxylase 5-like [Jatropha curcas]
7 Hb_062226_140 0.1966550708 - - PREDICTED: protein NEDD1 [Jatropha curcas]
8 Hb_000923_090 0.1967188346 - - -
9 Hb_000731_170 0.1973077609 - - PREDICTED: phospholipase A I [Jatropha curcas]
10 Hb_000696_160 0.1987084402 - - PREDICTED: SKP1-like protein 1B [Jatropha curcas]
11 Hb_001842_100 0.2008948287 rubber biosynthesis Gene Name: Dimethyallyltransferase hypothetical protein JCGZ_10905 [Jatropha curcas]
12 Hb_000676_140 0.2024559505 - - structural constituent of ribosome, putative [Ricinus communis]
13 Hb_003106_220 0.2035689459 - - PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X1 [Jatropha curcas]
14 Hb_000390_140 0.2043910652 - - PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Jatropha curcas]
15 Hb_000110_250 0.2050121305 - - PREDICTED: homologous-pairing protein 2 homolog [Jatropha curcas]
16 Hb_000795_060 0.2059670867 rubber biosynthesis Gene Name: Acetyl-CoA acetyltransferase acetyl-CoA C-acetyltransferase [Hevea brasiliensis]
17 Hb_001449_010 0.2062279823 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001269_610 0.2079965113 - - Chaperone protein dnaJ 8, chloroplast precursor, putative [Ricinus communis]
19 Hb_001065_070 0.2090604165 - - -
20 Hb_000525_020 0.2092480016 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_075265_010 Hb_075265_010 Hb_011909_120 Hb_011909_120 Hb_075265_010--Hb_011909_120 Hb_048898_010 Hb_048898_010 Hb_075265_010--Hb_048898_010 Hb_001322_040 Hb_001322_040 Hb_075265_010--Hb_001322_040 Hb_001799_110 Hb_001799_110 Hb_075265_010--Hb_001799_110 Hb_003206_120 Hb_003206_120 Hb_075265_010--Hb_003206_120 Hb_062226_140 Hb_062226_140 Hb_075265_010--Hb_062226_140 Hb_002461_060 Hb_002461_060 Hb_011909_120--Hb_002461_060 Hb_007423_040 Hb_007423_040 Hb_011909_120--Hb_007423_040 Hb_005730_120 Hb_005730_120 Hb_011909_120--Hb_005730_120 Hb_000126_010 Hb_000126_010 Hb_011909_120--Hb_000126_010 Hb_002217_510 Hb_002217_510 Hb_011909_120--Hb_002217_510 Hb_001123_030 Hb_001123_030 Hb_011909_120--Hb_001123_030 Hb_001449_010 Hb_001449_010 Hb_048898_010--Hb_001449_010 Hb_008013_050 Hb_008013_050 Hb_048898_010--Hb_008013_050 Hb_181729_010 Hb_181729_010 Hb_048898_010--Hb_181729_010 Hb_000525_020 Hb_000525_020 Hb_048898_010--Hb_000525_020 Hb_002304_160 Hb_002304_160 Hb_048898_010--Hb_002304_160 Hb_000684_270 Hb_000684_270 Hb_048898_010--Hb_000684_270 Hb_001215_040 Hb_001215_040 Hb_001322_040--Hb_001215_040 Hb_005365_030 Hb_005365_030 Hb_001322_040--Hb_005365_030 Hb_008226_060 Hb_008226_060 Hb_001322_040--Hb_008226_060 Hb_001057_040 Hb_001057_040 Hb_001322_040--Hb_001057_040 Hb_003389_040 Hb_003389_040 Hb_001322_040--Hb_003389_040 Hb_001133_120 Hb_001133_120 Hb_001322_040--Hb_001133_120 Hb_003362_080 Hb_003362_080 Hb_001799_110--Hb_003362_080 Hb_000959_310 Hb_000959_310 Hb_001799_110--Hb_000959_310 Hb_009976_010 Hb_009976_010 Hb_001799_110--Hb_009976_010 Hb_001799_110--Hb_001449_010 Hb_158144_010 Hb_158144_010 Hb_001799_110--Hb_158144_010 Hb_000224_200 Hb_000224_200 Hb_003206_120--Hb_000224_200 Hb_000003_080 Hb_000003_080 Hb_003206_120--Hb_000003_080 Hb_005288_190 Hb_005288_190 Hb_003206_120--Hb_005288_190 Hb_001842_100 Hb_001842_100 Hb_003206_120--Hb_001842_100 Hb_001416_010 Hb_001416_010 Hb_003206_120--Hb_001416_010 Hb_001143_130 Hb_001143_130 Hb_003206_120--Hb_001143_130 Hb_000342_100 Hb_000342_100 Hb_062226_140--Hb_000342_100 Hb_000207_400 Hb_000207_400 Hb_062226_140--Hb_000207_400 Hb_000331_470 Hb_000331_470 Hb_062226_140--Hb_000331_470 Hb_005391_040 Hb_005391_040 Hb_062226_140--Hb_005391_040 Hb_000465_390 Hb_000465_390 Hb_062226_140--Hb_000465_390 Hb_000111_380 Hb_000111_380 Hb_062226_140--Hb_000111_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.31097 2.74527 2.55404 3.17855 0.261873 2.764
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.57363 5.28019 0.191092 2.64981 1.48446

CAGE analysis