Hb_075315_010

Information

Type -
Description -
Location Contig75315: 1007-6136
Sequence    

Annotation

kegg
ID rcu:RCOM_0631280
description ornithine aminotransferase, putative (EC:2.6.1.13)
nr
ID AIC77166.1
description ornithine aminotransferase [Camellia sinensis]
swissprot
ID Q9FNK4
description Ornithine aminotransferase, mitochondrial OS=Arabidopsis thaliana GN=DELTA-OAT PE=1 SV=1
trembl
ID A0A068B2Q7
description Ornithine aminotransferase OS=Camellia sinensis GN=delta-OAT PE=2 SV=1
Gene Ontology
ID GO:0008270
description ornithine mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_075315_010 0.0 - - ornithine aminotransferase [Camellia sinensis]
2 Hb_083799_010 0.0774919105 - - ubiquitin-protein ligase, putative [Ricinus communis]
3 Hb_005081_020 0.0859163291 - - PREDICTED: ninja-family protein mc410 [Jatropha curcas]
4 Hb_039946_050 0.0860585706 - - catalytic, putative [Ricinus communis]
5 Hb_004450_070 0.0864062406 - - PREDICTED: 2-hydroxyacyl-CoA lyase [Jatropha curcas]
6 Hb_007747_170 0.0882397307 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
7 Hb_001105_160 0.0886019861 - - PREDICTED: protein phosphatase 2C 32 [Jatropha curcas]
8 Hb_001497_060 0.0916118834 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
9 Hb_006829_100 0.0927669671 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002686_310 0.0938652529 - - PREDICTED: aquaporin SIP1-1 [Jatropha curcas]
11 Hb_000395_220 0.0942206587 - - PREDICTED: LOW QUALITY PROTEIN: ultraviolet-B receptor UVR8 [Jatropha curcas]
12 Hb_002027_190 0.0942390427 - - PREDICTED: autophagy-related protein 18g [Jatropha curcas]
13 Hb_005333_050 0.0947843474 - - PREDICTED: glucose-6-phosphate isomerase 1, chloroplastic [Jatropha curcas]
14 Hb_041327_010 0.0966498981 - - PREDICTED: la-related protein 1A isoform X1 [Jatropha curcas]
15 Hb_000099_030 0.0970067357 - - 6-phosphogluconate dehydrogenase, putative [Ricinus communis]
16 Hb_002851_010 0.0972507602 - - sugar transporter, putative [Ricinus communis]
17 Hb_000243_300 0.0999066279 - - catalytic, putative [Ricinus communis]
18 Hb_000692_160 0.1001469068 - - Transportin 1 isoform 1 [Theobroma cacao]
19 Hb_020805_180 0.100361674 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
20 Hb_000069_120 0.100402829 - - PREDICTED: uncharacterized protein LOC105124742 isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_075315_010 Hb_075315_010 Hb_083799_010 Hb_083799_010 Hb_075315_010--Hb_083799_010 Hb_005081_020 Hb_005081_020 Hb_075315_010--Hb_005081_020 Hb_039946_050 Hb_039946_050 Hb_075315_010--Hb_039946_050 Hb_004450_070 Hb_004450_070 Hb_075315_010--Hb_004450_070 Hb_007747_170 Hb_007747_170 Hb_075315_010--Hb_007747_170 Hb_001105_160 Hb_001105_160 Hb_075315_010--Hb_001105_160 Hb_002272_170 Hb_002272_170 Hb_083799_010--Hb_002272_170 Hb_000395_220 Hb_000395_220 Hb_083799_010--Hb_000395_220 Hb_083799_010--Hb_005081_020 Hb_007426_140 Hb_007426_140 Hb_083799_010--Hb_007426_140 Hb_000260_660 Hb_000260_660 Hb_083799_010--Hb_000260_660 Hb_000692_160 Hb_000692_160 Hb_005081_020--Hb_000692_160 Hb_002391_210 Hb_002391_210 Hb_005081_020--Hb_002391_210 Hb_001269_140 Hb_001269_140 Hb_005081_020--Hb_001269_140 Hb_003906_170 Hb_003906_170 Hb_005081_020--Hb_003906_170 Hb_005663_110 Hb_005663_110 Hb_039946_050--Hb_005663_110 Hb_041327_010 Hb_041327_010 Hb_039946_050--Hb_041327_010 Hb_179306_020 Hb_179306_020 Hb_039946_050--Hb_179306_020 Hb_000099_030 Hb_000099_030 Hb_039946_050--Hb_000099_030 Hb_000069_120 Hb_000069_120 Hb_039946_050--Hb_000069_120 Hb_000537_050 Hb_000537_050 Hb_039946_050--Hb_000537_050 Hb_000890_070 Hb_000890_070 Hb_004450_070--Hb_000890_070 Hb_019280_010 Hb_019280_010 Hb_004450_070--Hb_019280_010 Hb_000152_700 Hb_000152_700 Hb_004450_070--Hb_000152_700 Hb_001642_070 Hb_001642_070 Hb_004450_070--Hb_001642_070 Hb_004677_050 Hb_004677_050 Hb_004450_070--Hb_004677_050 Hb_000237_050 Hb_000237_050 Hb_004450_070--Hb_000237_050 Hb_019840_030 Hb_019840_030 Hb_007747_170--Hb_019840_030 Hb_007747_170--Hb_004450_070 Hb_000608_230 Hb_000608_230 Hb_007747_170--Hb_000608_230 Hb_007245_020 Hb_007245_020 Hb_007747_170--Hb_007245_020 Hb_000331_580 Hb_000331_580 Hb_007747_170--Hb_000331_580 Hb_002027_190 Hb_002027_190 Hb_007747_170--Hb_002027_190 Hb_011287_050 Hb_011287_050 Hb_001105_160--Hb_011287_050 Hb_001105_160--Hb_041327_010 Hb_005568_040 Hb_005568_040 Hb_001105_160--Hb_005568_040 Hb_012092_060 Hb_012092_060 Hb_001105_160--Hb_012092_060 Hb_071130_010 Hb_071130_010 Hb_001105_160--Hb_071130_010 Hb_010809_010 Hb_010809_010 Hb_001105_160--Hb_010809_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.41714 5.99099 2.71954 7.24266 4.03301 4.80232
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.65387 2.19725 2.57247 11.7335 4.81727

CAGE analysis