Hb_075497_010

Information

Type -
Description -
Location Contig75497: 6000-8156
Sequence    

Annotation

kegg
ID rcu:RCOM_0304730
description mutt domain protein, putative (EC:3.6.1.22)
nr
ID KDP29942.1
description hypothetical protein JCGZ_18511 [Jatropha curcas]
swissprot
ID Q94B74
description Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2 PE=1 SV=1
trembl
ID A0A067K1D4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18511 PE=3 SV=1
Gene Ontology
ID GO:0000210
description nudix hydrolase 2-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_075497_010 0.0 - - hypothetical protein JCGZ_18511 [Jatropha curcas]
2 Hb_001114_120 0.1790041705 - - protein with unknown function [Ricinus communis]
3 Hb_002003_010 0.1802611806 - - hypothetical protein JCGZ_15062 [Jatropha curcas]
4 Hb_003086_010 0.1828619491 - - hypothetical protein JCGZ_06093 [Jatropha curcas]
5 Hb_172426_050 0.1879463961 - - PREDICTED: uncharacterized protein LOC105634266 [Jatropha curcas]
6 Hb_000317_230 0.1894762785 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
7 Hb_000005_230 0.190035578 - - hypothetical protein POPTR_0009s01160g [Populus trichocarpa]
8 Hb_007313_010 0.1905145578 - - hypothetical protein JCGZ_23398 [Jatropha curcas]
9 Hb_000834_210 0.1912695729 - - unnamed protein product [Vitis vinifera]
10 Hb_002307_010 0.1920560334 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
11 Hb_000017_320 0.1940646223 transcription factor TF Family: bHLH PREDICTED: transcription factor GLABRA 3-like isoform X1 [Jatropha curcas]
12 Hb_000009_130 0.1947667333 - - hypothetical protein POPTR_0007s12410g [Populus trichocarpa]
13 Hb_005730_070 0.197339406 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 8 [Jatropha curcas]
14 Hb_000022_280 0.1985924579 - - PREDICTED: uncharacterized protein LOC105638282 [Jatropha curcas]
15 Hb_000300_170 0.1997536309 - - PREDICTED: uncharacterized protein LOC105632565 [Jatropha curcas]
16 Hb_001018_080 0.2010039476 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003160_050 0.2021412625 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
18 Hb_011129_020 0.202879649 - - Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]
19 Hb_000317_220 0.2034823997 - - conserved hypothetical protein [Ricinus communis]
20 Hb_010174_170 0.2041061735 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_075497_010 Hb_075497_010 Hb_001114_120 Hb_001114_120 Hb_075497_010--Hb_001114_120 Hb_002003_010 Hb_002003_010 Hb_075497_010--Hb_002003_010 Hb_003086_010 Hb_003086_010 Hb_075497_010--Hb_003086_010 Hb_172426_050 Hb_172426_050 Hb_075497_010--Hb_172426_050 Hb_000317_230 Hb_000317_230 Hb_075497_010--Hb_000317_230 Hb_000005_230 Hb_000005_230 Hb_075497_010--Hb_000005_230 Hb_002307_010 Hb_002307_010 Hb_001114_120--Hb_002307_010 Hb_000112_050 Hb_000112_050 Hb_001114_120--Hb_000112_050 Hb_000203_080 Hb_000203_080 Hb_001114_120--Hb_000203_080 Hb_003847_050 Hb_003847_050 Hb_001114_120--Hb_003847_050 Hb_002448_020 Hb_002448_020 Hb_001114_120--Hb_002448_020 Hb_007386_030 Hb_007386_030 Hb_001114_120--Hb_007386_030 Hb_000017_320 Hb_000017_320 Hb_002003_010--Hb_000017_320 Hb_000834_210 Hb_000834_210 Hb_002003_010--Hb_000834_210 Hb_001349_020 Hb_001349_020 Hb_002003_010--Hb_001349_020 Hb_003160_050 Hb_003160_050 Hb_002003_010--Hb_003160_050 Hb_005730_070 Hb_005730_070 Hb_002003_010--Hb_005730_070 Hb_002003_010--Hb_001114_120 Hb_003086_010--Hb_172426_050 Hb_000116_120 Hb_000116_120 Hb_003086_010--Hb_000116_120 Hb_000720_090 Hb_000720_090 Hb_003086_010--Hb_000720_090 Hb_021409_140 Hb_021409_140 Hb_003086_010--Hb_021409_140 Hb_078081_010 Hb_078081_010 Hb_003086_010--Hb_078081_010 Hb_001405_150 Hb_001405_150 Hb_003086_010--Hb_001405_150 Hb_000186_290 Hb_000186_290 Hb_172426_050--Hb_000186_290 Hb_001287_060 Hb_001287_060 Hb_172426_050--Hb_001287_060 Hb_004324_030 Hb_004324_030 Hb_172426_050--Hb_004324_030 Hb_172426_050--Hb_021409_140 Hb_002739_040 Hb_002739_040 Hb_172426_050--Hb_002739_040 Hb_003788_010 Hb_003788_010 Hb_000317_230--Hb_003788_010 Hb_000317_220 Hb_000317_220 Hb_000317_230--Hb_000317_220 Hb_002028_160 Hb_002028_160 Hb_000317_230--Hb_002028_160 Hb_001856_160 Hb_001856_160 Hb_000317_230--Hb_001856_160 Hb_000022_280 Hb_000022_280 Hb_000317_230--Hb_000022_280 Hb_003376_300 Hb_003376_300 Hb_000317_230--Hb_003376_300 Hb_006788_010 Hb_006788_010 Hb_000005_230--Hb_006788_010 Hb_002597_010 Hb_002597_010 Hb_000005_230--Hb_002597_010 Hb_006618_080 Hb_006618_080 Hb_000005_230--Hb_006618_080 Hb_000032_560 Hb_000032_560 Hb_000005_230--Hb_000032_560 Hb_007313_010 Hb_007313_010 Hb_000005_230--Hb_007313_010 Hb_000347_230 Hb_000347_230 Hb_000005_230--Hb_000347_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.320331 0.532828 0.624024 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.180593 0 0 1.29927 0.191611

CAGE analysis