Hb_075964_010

Information

Type -
Description -
Location Contig75964: 224-606
Sequence    

Annotation

kegg
ID rcu:RCOM_0724600
description Leucine-rich repeat receptor protein kinase EXS precursor, putative (EC:2.7.11.25)
nr
ID KDP27374.1
description hypothetical protein JCGZ_20198 [Jatropha curcas]
swissprot
ID Q9SYS7
description Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=3 SV=1
trembl
ID A0A067K6D5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20198 PE=4 SV=1
Gene Ontology
ID GO:0000166
description g-type lectin s-receptor-like serine threonine-protein kinase rks1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_075964_010 0.0 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
2 Hb_001427_060 0.1580933952 - - -
3 Hb_171789_010 0.1605890537 - - phosphoenolpyruvate carboxylase [Glycine max]
4 Hb_032927_010 0.1619052052 - - -
5 Hb_005916_030 0.1653389491 - - PREDICTED: uncharacterized protein At2g29880-like [Jatropha curcas]
6 Hb_005965_010 0.1705667241 transcription factor TF Family: MYB-related PREDICTED: myb family transcription factor APL-like [Jatropha curcas]
7 Hb_115477_010 0.1711261666 - - Protein dom-3, putative [Ricinus communis]
8 Hb_006502_080 0.1778561906 - - -
9 Hb_000575_080 0.1786715737 - - PREDICTED: CD2 antigen cytoplasmic tail-binding protein 2 isoform X1 [Jatropha curcas]
10 Hb_002960_050 0.1799323106 - - PREDICTED: uncharacterized protein LOC105635325 [Jatropha curcas]
11 Hb_012180_040 0.1822920716 - - hypothetical protein VITISV_042517 [Vitis vinifera]
12 Hb_039253_010 0.184524917 - - PREDICTED: zinc finger CCCH domain-containing protein 31 isoform X2 [Jatropha curcas]
13 Hb_006455_110 0.1849870346 - - bromodomain-containing protein, putative [Ricinus communis]
14 Hb_000812_040 0.1883690527 - - zinc finger family protein [Populus trichocarpa]
15 Hb_000364_150 0.1953904161 - - -
16 Hb_006663_070 0.196215843 - - PREDICTED: uncharacterized protein LOC105637432 [Jatropha curcas]
17 Hb_002205_050 0.1963930291 - - hypothetical protein JCGZ_03335 [Jatropha curcas]
18 Hb_002092_090 0.1978686261 - - PREDICTED: aspartic proteinase Asp1 [Jatropha curcas]
19 Hb_000295_100 0.198335414 - - -
20 Hb_106005_010 0.199495062 - - EG5651 [Manihot esculenta]

Gene co-expression network

sample Hb_075964_010 Hb_075964_010 Hb_001427_060 Hb_001427_060 Hb_075964_010--Hb_001427_060 Hb_171789_010 Hb_171789_010 Hb_075964_010--Hb_171789_010 Hb_032927_010 Hb_032927_010 Hb_075964_010--Hb_032927_010 Hb_005916_030 Hb_005916_030 Hb_075964_010--Hb_005916_030 Hb_005965_010 Hb_005965_010 Hb_075964_010--Hb_005965_010 Hb_115477_010 Hb_115477_010 Hb_075964_010--Hb_115477_010 Hb_000007_460 Hb_000007_460 Hb_001427_060--Hb_000007_460 Hb_003581_010 Hb_003581_010 Hb_001427_060--Hb_003581_010 Hb_068014_010 Hb_068014_010 Hb_001427_060--Hb_068014_010 Hb_007484_040 Hb_007484_040 Hb_001427_060--Hb_007484_040 Hb_013691_030 Hb_013691_030 Hb_001427_060--Hb_013691_030 Hb_000136_060 Hb_000136_060 Hb_171789_010--Hb_000136_060 Hb_022400_010 Hb_022400_010 Hb_171789_010--Hb_022400_010 Hb_006642_040 Hb_006642_040 Hb_171789_010--Hb_006642_040 Hb_002805_070 Hb_002805_070 Hb_171789_010--Hb_002805_070 Hb_001840_070 Hb_001840_070 Hb_171789_010--Hb_001840_070 Hb_039253_010 Hb_039253_010 Hb_171789_010--Hb_039253_010 Hb_000812_040 Hb_000812_040 Hb_032927_010--Hb_000812_040 Hb_067776_010 Hb_067776_010 Hb_032927_010--Hb_067776_010 Hb_006502_080 Hb_006502_080 Hb_032927_010--Hb_006502_080 Hb_007188_020 Hb_007188_020 Hb_032927_010--Hb_007188_020 Hb_152554_010 Hb_152554_010 Hb_032927_010--Hb_152554_010 Hb_136731_010 Hb_136731_010 Hb_032927_010--Hb_136731_010 Hb_000995_050 Hb_000995_050 Hb_005916_030--Hb_000995_050 Hb_000575_080 Hb_000575_080 Hb_005916_030--Hb_000575_080 Hb_005260_020 Hb_005260_020 Hb_005916_030--Hb_005260_020 Hb_022461_010 Hb_022461_010 Hb_005916_030--Hb_022461_010 Hb_001054_130 Hb_001054_130 Hb_005916_030--Hb_001054_130 Hb_005916_030--Hb_006502_080 Hb_006455_110 Hb_006455_110 Hb_005965_010--Hb_006455_110 Hb_073339_010 Hb_073339_010 Hb_005965_010--Hb_073339_010 Hb_106005_010 Hb_106005_010 Hb_005965_010--Hb_106005_010 Hb_012807_080 Hb_012807_080 Hb_005965_010--Hb_012807_080 Hb_006455_080 Hb_006455_080 Hb_005965_010--Hb_006455_080 Hb_006455_090 Hb_006455_090 Hb_005965_010--Hb_006455_090 Hb_115107_010 Hb_115107_010 Hb_115477_010--Hb_115107_010 Hb_168973_010 Hb_168973_010 Hb_115477_010--Hb_168973_010 Hb_006663_090 Hb_006663_090 Hb_115477_010--Hb_006663_090 Hb_007026_040 Hb_007026_040 Hb_115477_010--Hb_007026_040 Hb_001386_140 Hb_001386_140 Hb_115477_010--Hb_001386_140 Hb_010565_010 Hb_010565_010 Hb_115477_010--Hb_010565_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.12213 5.36645 1.96271 4.29643 4.51679 33.0496
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.3426 5.72191 5.85989 8.34004 2.639

CAGE analysis