Hb_076233_030

Information

Type -
Description -
Location Contig76233: 8563-12817
Sequence    

Annotation

kegg
ID pop:POPTR_0012s06760g
description POPTRDRAFT_569934; 3-PHOSPHOSERINE PHOSPHATASE family protein
nr
ID XP_012080378.1
description PREDICTED: phosphoserine phosphatase, chloroplastic [Jatropha curcas]
swissprot
ID O82796
description Phosphoserine phosphatase, chloroplastic OS=Arabidopsis thaliana GN=PSP PE=1 SV=2
trembl
ID A0A067K5F0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11723 PE=4 SV=1
Gene Ontology
ID GO:0016791
description phosphoserine chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_076233_030 0.0 - - PREDICTED: phosphoserine phosphatase, chloroplastic [Jatropha curcas]
2 Hb_000189_390 0.1231737713 - - PREDICTED: pollen-specific protein SF21-like isoform X1 [Jatropha curcas]
3 Hb_014497_030 0.1689404482 - - PREDICTED: mitotic spindle checkpoint protein BUBR1 [Jatropha curcas]
4 Hb_000803_090 0.1722745635 - - PREDICTED: transcription initiation factor IIB isoform X1 [Jatropha curcas]
5 Hb_002030_120 0.1813402487 - - -
6 Hb_002960_110 0.1879666634 - - PREDICTED: synaptotagmin-2 isoform X1 [Jatropha curcas]
7 Hb_003529_180 0.1903593999 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
8 Hb_011609_010 0.1904415621 - - PREDICTED: zinc transporter 5 [Jatropha curcas]
9 Hb_008725_140 0.1942685113 - - PREDICTED: kynurenine--oxoglutarate transaminase-like isoform X1 [Jatropha curcas]
10 Hb_001624_040 0.19610314 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Jatropha curcas]
11 Hb_002301_210 0.1962671842 - - PREDICTED: receptor-like protein kinase At5g59670 isoform X2 [Jatropha curcas]
12 Hb_002249_040 0.1968362859 transcription factor TF Family: bHLH PREDICTED: transcription factor ICE1-like [Jatropha curcas]
13 Hb_124951_010 0.1972703992 - - chitinase-like protein [Hevea brasiliensis]
14 Hb_073973_030 0.2019139354 - - PREDICTED: uncharacterized protein LOC105638905 isoform X2 [Jatropha curcas]
15 Hb_002600_130 0.2035184971 - - PREDICTED: uncharacterized protein LOC105646808 [Jatropha curcas]
16 Hb_004725_030 0.2064687851 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X4 [Jatropha curcas]
17 Hb_000424_070 0.207906098 - - PREDICTED: serine/arginine repetitive matrix protein 2-like [Jatropha curcas]
18 Hb_000985_040 0.2103478401 transcription factor TF Family: Orphans B-box type zinc finger protein with CCT domain isoform 1 [Theobroma cacao]
19 Hb_074792_010 0.210461821 - - PREDICTED: probable lactoylglutathione lyase, chloroplast [Gossypium raimondii]
20 Hb_000077_120 0.2106486164 - - PREDICTED: two pore calcium channel protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_076233_030 Hb_076233_030 Hb_000189_390 Hb_000189_390 Hb_076233_030--Hb_000189_390 Hb_014497_030 Hb_014497_030 Hb_076233_030--Hb_014497_030 Hb_000803_090 Hb_000803_090 Hb_076233_030--Hb_000803_090 Hb_002030_120 Hb_002030_120 Hb_076233_030--Hb_002030_120 Hb_002960_110 Hb_002960_110 Hb_076233_030--Hb_002960_110 Hb_003529_180 Hb_003529_180 Hb_076233_030--Hb_003529_180 Hb_000189_390--Hb_014497_030 Hb_000189_390--Hb_000803_090 Hb_011609_010 Hb_011609_010 Hb_000189_390--Hb_011609_010 Hb_000189_390--Hb_003529_180 Hb_124951_010 Hb_124951_010 Hb_000189_390--Hb_124951_010 Hb_014497_030--Hb_000803_090 Hb_014497_030--Hb_011609_010 Hb_001776_200 Hb_001776_200 Hb_014497_030--Hb_001776_200 Hb_002301_210 Hb_002301_210 Hb_014497_030--Hb_002301_210 Hb_000803_090--Hb_011609_010 Hb_003747_050 Hb_003747_050 Hb_000803_090--Hb_003747_050 Hb_000008_390 Hb_000008_390 Hb_000803_090--Hb_000008_390 Hb_001624_040 Hb_001624_040 Hb_000803_090--Hb_001624_040 Hb_000803_090--Hb_002301_210 Hb_000631_090 Hb_000631_090 Hb_000803_090--Hb_000631_090 Hb_002030_120--Hb_014497_030 Hb_002030_120--Hb_000189_390 Hb_000985_040 Hb_000985_040 Hb_002030_120--Hb_000985_040 Hb_002030_120--Hb_000803_090 Hb_002249_040 Hb_002249_040 Hb_002030_120--Hb_002249_040 Hb_000424_070 Hb_000424_070 Hb_002960_110--Hb_000424_070 Hb_074792_010 Hb_074792_010 Hb_002960_110--Hb_074792_010 Hb_002960_110--Hb_000189_390 Hb_002960_110--Hb_003529_180 Hb_000300_710 Hb_000300_710 Hb_002960_110--Hb_000300_710 Hb_000638_260 Hb_000638_260 Hb_002960_110--Hb_000638_260 Hb_002600_130 Hb_002600_130 Hb_003529_180--Hb_002600_130 Hb_000732_030 Hb_000732_030 Hb_003529_180--Hb_000732_030 Hb_003529_180--Hb_011609_010 Hb_004725_030 Hb_004725_030 Hb_003529_180--Hb_004725_030 Hb_000009_220 Hb_000009_220 Hb_003529_180--Hb_000009_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.156031 0.283897 0.907445 0.120165 0.168431 0.350528
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0432897 0 0.0631628 0.0955828 0.140501

CAGE analysis