Hb_076771_010

Information

Type -
Description -
Location Contig76771: 14-1997
Sequence    

Annotation

kegg
ID rcu:RCOM_0687360
description leucine-rich repeat-containing protein 2, lrrc2, putative (EC:3.1.3.16)
nr
ID XP_012090562.1
description PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
swissprot
ID Q9LRR4
description Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 SV=1
trembl
ID A0A067LBZ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01203 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_076771_010 0.0 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
2 Hb_002676_110 0.0950527944 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]
3 Hb_002233_080 0.1018275494 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
4 Hb_001663_090 0.106101802 - - ribonuclease t2, putative [Ricinus communis]
5 Hb_029622_090 0.1121924621 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
6 Hb_000010_220 0.1166840516 - - PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]
7 Hb_010721_010 0.1172029385 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
8 Hb_011915_020 0.129667248 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
9 Hb_001675_310 0.1302041744 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X1 [Jatropha curcas]
10 Hb_012272_010 0.1355593744 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
11 Hb_000028_330 0.1359853179 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
12 Hb_001430_010 0.1365976179 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
13 Hb_001019_020 0.1388401279 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002739_160 0.1392097657 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
15 Hb_001610_070 0.1421136613 - - hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
16 Hb_000172_230 0.1470734176 - - myo-inositol-1 phosphate synthase [Hevea brasiliensis]
17 Hb_000060_080 0.1499801976 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis]
18 Hb_070634_010 0.1503635686 - - TMV resistance protein N, putative [Ricinus communis]
19 Hb_004324_100 0.1515654231 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
20 Hb_002048_070 0.151858093 - - hypothetical protein JCGZ_15146 [Jatropha curcas]

Gene co-expression network

sample Hb_076771_010 Hb_076771_010 Hb_002676_110 Hb_002676_110 Hb_076771_010--Hb_002676_110 Hb_002233_080 Hb_002233_080 Hb_076771_010--Hb_002233_080 Hb_001663_090 Hb_001663_090 Hb_076771_010--Hb_001663_090 Hb_029622_090 Hb_029622_090 Hb_076771_010--Hb_029622_090 Hb_000010_220 Hb_000010_220 Hb_076771_010--Hb_000010_220 Hb_010721_010 Hb_010721_010 Hb_076771_010--Hb_010721_010 Hb_002676_110--Hb_001663_090 Hb_000060_080 Hb_000060_080 Hb_002676_110--Hb_000060_080 Hb_004631_100 Hb_004631_100 Hb_002676_110--Hb_004631_100 Hb_002676_110--Hb_010721_010 Hb_070634_010 Hb_070634_010 Hb_002676_110--Hb_070634_010 Hb_001019_020 Hb_001019_020 Hb_002233_080--Hb_001019_020 Hb_001675_310 Hb_001675_310 Hb_002233_080--Hb_001675_310 Hb_012272_010 Hb_012272_010 Hb_002233_080--Hb_012272_010 Hb_004297_080 Hb_004297_080 Hb_002233_080--Hb_004297_080 Hb_094437_050 Hb_094437_050 Hb_002233_080--Hb_094437_050 Hb_001663_090--Hb_029622_090 Hb_000028_330 Hb_000028_330 Hb_001663_090--Hb_000028_330 Hb_002739_160 Hb_002739_160 Hb_001663_090--Hb_002739_160 Hb_001663_090--Hb_000060_080 Hb_030827_080 Hb_030827_080 Hb_001663_090--Hb_030827_080 Hb_029622_090--Hb_000028_330 Hb_002048_070 Hb_002048_070 Hb_029622_090--Hb_002048_070 Hb_011915_020 Hb_011915_020 Hb_029622_090--Hb_011915_020 Hb_021576_160 Hb_021576_160 Hb_029622_090--Hb_021576_160 Hb_004324_100 Hb_004324_100 Hb_029622_090--Hb_004324_100 Hb_000010_220--Hb_001663_090 Hb_000010_220--Hb_004324_100 Hb_000010_220--Hb_002739_160 Hb_002597_030 Hb_002597_030 Hb_000010_220--Hb_002597_030 Hb_170632_010 Hb_170632_010 Hb_000010_220--Hb_170632_010 Hb_023386_060 Hb_023386_060 Hb_010721_010--Hb_023386_060 Hb_010721_010--Hb_002048_070 Hb_001430_010 Hb_001430_010 Hb_010721_010--Hb_001430_010 Hb_010721_010--Hb_011915_020 Hb_010721_010--Hb_001663_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.359691 6.70774 6.08305 8.87658 0.177174 0.164578
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.05565 1.11294

CAGE analysis