Hb_076787_010

Information

Type -
Description -
Location Contig76787: 5673-23507
Sequence    

Annotation

kegg
ID rcu:RCOM_0742540
description hypothetical protein
nr
ID XP_012077097.1
description PREDICTED: phospholipase SGR2 isoform X2 [Jatropha curcas]
swissprot
ID Q8W5R2
description Phospholipase SGR2 OS=Arabidopsis thaliana GN=SGR2 PE=1 SV=1
trembl
ID A0A067LMH5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17221 PE=4 SV=1
Gene Ontology
ID GO:0009506
description phospholipase sgr2-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57478: 9992-23915
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_076787_010 0.0 - - PREDICTED: phospholipase SGR2 isoform X2 [Jatropha curcas]
2 Hb_005063_040 0.0638237599 - - PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X1 [Jatropha curcas]
3 Hb_000085_060 0.0722137386 - - PREDICTED: uncharacterized protein LOC105633020 [Jatropha curcas]
4 Hb_001776_110 0.0743851751 - - PREDICTED: pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Jatropha curcas]
5 Hb_001862_190 0.0748179756 - - PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1 isoform X2 [Jatropha curcas]
6 Hb_000179_170 0.0793313276 - - PREDICTED: protein bem46 isoform X1 [Jatropha curcas]
7 Hb_006692_030 0.0801258385 - - PREDICTED: uncharacterized protein LOC105632913 [Jatropha curcas]
8 Hb_150069_020 0.0805042942 - - PREDICTED: ribosome biogenesis regulatory protein homolog isoform X1 [Jatropha curcas]
9 Hb_007218_080 0.0824729939 - - PREDICTED: uncharacterized protein LOC105631523 [Jatropha curcas]
10 Hb_000120_500 0.0830292368 - - PREDICTED: AT-hook motif nuclear-localized protein 10-like [Jatropha curcas]
11 Hb_007894_140 0.0830628907 - - PREDICTED: polyadenylate-binding protein-interacting protein 4 [Jatropha curcas]
12 Hb_028639_060 0.0836642176 - - transporter, putative [Ricinus communis]
13 Hb_003392_040 0.0837798596 - - PREDICTED: D-aminoacyl-tRNA deacylase [Jatropha curcas]
14 Hb_002272_250 0.0854290922 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_033153_050 0.0856090269 transcription factor TF Family: VOZ conserved hypothetical protein [Ricinus communis]
16 Hb_000032_570 0.0863318717 transcription factor TF Family: Coactivator p15 PREDICTED: RNA polymerase II transcriptional coactivator KELP [Jatropha curcas]
17 Hb_003602_040 0.0864869703 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
18 Hb_005662_030 0.0865467827 - - protein with unknown function [Ricinus communis]
19 Hb_003540_040 0.0869968236 - - hypothetical protein JCGZ_20979 [Jatropha curcas]
20 Hb_005306_110 0.0870866382 - - casein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_076787_010 Hb_076787_010 Hb_005063_040 Hb_005063_040 Hb_076787_010--Hb_005063_040 Hb_000085_060 Hb_000085_060 Hb_076787_010--Hb_000085_060 Hb_001776_110 Hb_001776_110 Hb_076787_010--Hb_001776_110 Hb_001862_190 Hb_001862_190 Hb_076787_010--Hb_001862_190 Hb_000179_170 Hb_000179_170 Hb_076787_010--Hb_000179_170 Hb_006692_030 Hb_006692_030 Hb_076787_010--Hb_006692_030 Hb_002616_050 Hb_002616_050 Hb_005063_040--Hb_002616_050 Hb_007101_100 Hb_007101_100 Hb_005063_040--Hb_007101_100 Hb_028872_140 Hb_028872_140 Hb_005063_040--Hb_028872_140 Hb_003005_020 Hb_003005_020 Hb_005063_040--Hb_003005_020 Hb_001030_120 Hb_001030_120 Hb_005063_040--Hb_001030_120 Hb_001124_120 Hb_001124_120 Hb_000085_060--Hb_001124_120 Hb_031939_010 Hb_031939_010 Hb_000085_060--Hb_031939_010 Hb_001014_010 Hb_001014_010 Hb_000085_060--Hb_001014_010 Hb_003406_010 Hb_003406_010 Hb_000085_060--Hb_003406_010 Hb_007218_080 Hb_007218_080 Hb_000085_060--Hb_007218_080 Hb_003540_040 Hb_003540_040 Hb_001776_110--Hb_003540_040 Hb_006569_020 Hb_006569_020 Hb_001776_110--Hb_006569_020 Hb_010436_070 Hb_010436_070 Hb_001776_110--Hb_010436_070 Hb_004662_030 Hb_004662_030 Hb_001776_110--Hb_004662_030 Hb_002097_110 Hb_002097_110 Hb_001776_110--Hb_002097_110 Hb_000029_030 Hb_000029_030 Hb_001776_110--Hb_000029_030 Hb_033153_050 Hb_033153_050 Hb_001862_190--Hb_033153_050 Hb_000134_090 Hb_000134_090 Hb_001862_190--Hb_000134_090 Hb_006922_100 Hb_006922_100 Hb_001862_190--Hb_006922_100 Hb_001322_190 Hb_001322_190 Hb_001862_190--Hb_001322_190 Hb_005662_030 Hb_005662_030 Hb_001862_190--Hb_005662_030 Hb_007477_080 Hb_007477_080 Hb_001862_190--Hb_007477_080 Hb_022137_060 Hb_022137_060 Hb_000179_170--Hb_022137_060 Hb_000529_160 Hb_000529_160 Hb_000179_170--Hb_000529_160 Hb_002400_220 Hb_002400_220 Hb_000179_170--Hb_002400_220 Hb_150360_030 Hb_150360_030 Hb_000179_170--Hb_150360_030 Hb_001135_050 Hb_001135_050 Hb_000179_170--Hb_001135_050 Hb_009133_010 Hb_009133_010 Hb_006692_030--Hb_009133_010 Hb_000032_570 Hb_000032_570 Hb_006692_030--Hb_000032_570 Hb_006692_030--Hb_007218_080 Hb_000889_020 Hb_000889_020 Hb_006692_030--Hb_000889_020 Hb_001789_240 Hb_001789_240 Hb_006692_030--Hb_001789_240 Hb_000120_500 Hb_000120_500 Hb_006692_030--Hb_000120_500
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.4748 5.69163 7.19283 6.69377 20.4954 25.7712
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
25.3311 16.1516 14.1382 7.45377 6.63236

CAGE analysis