Hb_076875_020

Information

Type -
Description -
Location Contig76875: 6852-7166
Sequence    

Annotation

kegg
ID rcu:RCOM_1728520
description hypothetical protein
nr
ID XP_012078010.1
description PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
swissprot
ID Q6DEY3
description Alpha/beta hydrolase domain-containing protein 17B OS=Xenopus tropicalis GN=abhd17b PE=2 SV=1
trembl
ID A0A067KMF6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13025 PE=4 SV=1
Gene Ontology
ID GO:0016787
description alpha beta hydrolase domain-containing protein 17b-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57543: 7145-7288
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_076875_020 0.0 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
2 Hb_010565_010 0.1176877331 - - PREDICTED: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like isoform X2 [Populus euphratica]
3 Hb_152554_010 0.1210141047 - - hypothetical protein B456_008G095800, partial [Gossypium raimondii]
4 Hb_000812_040 0.1226098141 - - zinc finger family protein [Populus trichocarpa]
5 Hb_001135_140 0.1248232984 - - PREDICTED: serine/threonine-protein kinase PBS1-like [Malus domestica]
6 Hb_038237_010 0.1277203849 - - hypothetical protein POPTR_0003s01110g [Populus trichocarpa]
7 Hb_007188_020 0.1309063714 - - hypothetical protein PRUPE_ppb010436mg [Prunus persica]
8 Hb_067776_010 0.1314004802 - - mitochondrial 39S ribosomal protein L53 [Hevea brasiliensis]
9 Hb_003633_040 0.1338052076 - - hypothetical protein B456_008G146200 [Gossypium raimondii]
10 Hb_001386_140 0.1407586522 - - PREDICTED: B2 protein [Jatropha curcas]
11 Hb_115107_010 0.1414534595 - - Early-responsive to dehydration stress protein (ERD4) isoform 1 [Theobroma cacao]
12 Hb_003371_170 0.1433338793 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005023_030 0.1446274486 - - PREDICTED: uncharacterized protein LOC103417254 [Malus domestica]
14 Hb_002687_080 0.1451380643 - - hypothetical protein JCGZ_06535 [Jatropha curcas]
15 Hb_005714_130 0.145724264 transcription factor TF Family: C2H2 unknown [Populus trichocarpa x Populus deltoides]
16 Hb_005367_010 0.1462923522 - - -
17 Hb_000074_060 0.1465281208 - - PREDICTED: membrane-associated progesterone-binding protein 4-like [Populus euphratica]
18 Hb_168973_010 0.1471975525 - - -
19 Hb_032927_010 0.1490617926 - - -
20 Hb_002007_180 0.1492719593 - - PREDICTED: uncharacterized protein LOC105647525 [Jatropha curcas]

Gene co-expression network

sample Hb_076875_020 Hb_076875_020 Hb_010565_010 Hb_010565_010 Hb_076875_020--Hb_010565_010 Hb_152554_010 Hb_152554_010 Hb_076875_020--Hb_152554_010 Hb_000812_040 Hb_000812_040 Hb_076875_020--Hb_000812_040 Hb_001135_140 Hb_001135_140 Hb_076875_020--Hb_001135_140 Hb_038237_010 Hb_038237_010 Hb_076875_020--Hb_038237_010 Hb_007188_020 Hb_007188_020 Hb_076875_020--Hb_007188_020 Hb_002067_120 Hb_002067_120 Hb_010565_010--Hb_002067_120 Hb_001386_140 Hb_001386_140 Hb_010565_010--Hb_001386_140 Hb_000606_080 Hb_000606_080 Hb_010565_010--Hb_000606_080 Hb_005023_030 Hb_005023_030 Hb_010565_010--Hb_005023_030 Hb_004934_070 Hb_004934_070 Hb_010565_010--Hb_004934_070 Hb_005714_130 Hb_005714_130 Hb_010565_010--Hb_005714_130 Hb_152554_010--Hb_007188_020 Hb_006487_060 Hb_006487_060 Hb_152554_010--Hb_006487_060 Hb_152554_010--Hb_000812_040 Hb_003861_040 Hb_003861_040 Hb_152554_010--Hb_003861_040 Hb_001377_180 Hb_001377_180 Hb_152554_010--Hb_001377_180 Hb_000176_120 Hb_000176_120 Hb_152554_010--Hb_000176_120 Hb_032927_010 Hb_032927_010 Hb_000812_040--Hb_032927_010 Hb_067776_010 Hb_067776_010 Hb_000812_040--Hb_067776_010 Hb_006502_080 Hb_006502_080 Hb_000812_040--Hb_006502_080 Hb_140291_010 Hb_140291_010 Hb_000812_040--Hb_140291_010 Hb_022250_130 Hb_022250_130 Hb_000812_040--Hb_022250_130 Hb_001135_140--Hb_005023_030 Hb_002110_040 Hb_002110_040 Hb_001135_140--Hb_002110_040 Hb_115107_010 Hb_115107_010 Hb_001135_140--Hb_115107_010 Hb_000359_140 Hb_000359_140 Hb_001135_140--Hb_000359_140 Hb_001135_140--Hb_002067_120 Hb_001018_130 Hb_001018_130 Hb_001135_140--Hb_001018_130 Hb_038237_010--Hb_152554_010 Hb_000825_030 Hb_000825_030 Hb_038237_010--Hb_000825_030 Hb_129672_010 Hb_129672_010 Hb_038237_010--Hb_129672_010 Hb_005527_020 Hb_005527_020 Hb_038237_010--Hb_005527_020 Hb_000676_080 Hb_000676_080 Hb_038237_010--Hb_000676_080 Hb_116632_010 Hb_116632_010 Hb_007188_020--Hb_116632_010 Hb_007188_020--Hb_032927_010 Hb_000001_040 Hb_000001_040 Hb_007188_020--Hb_000001_040 Hb_007188_020--Hb_000812_040 Hb_005085_030 Hb_005085_030 Hb_007188_020--Hb_005085_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.2473 23.814 11.4455 71.3746 26.8025 118.084
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
25.5658 53.0383 28.9397 32.9044 10.7776

CAGE analysis