Hb_077549_010

Information

Type -
Description -
Location Contig77549: 332-820
Sequence    

Annotation

kegg
ID rcu:RCOM_1080040
description hypothetical protein
nr
ID XP_012085684.1
description PREDICTED: uncharacterized protein LOC105644817 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JSF4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17965 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_077549_010 0.0 - - PREDICTED: uncharacterized protein LOC105644817 isoform X1 [Jatropha curcas]
2 Hb_029584_040 0.0845636833 - - hypothetical protein Csa_1G586790 [Cucumis sativus]
3 Hb_174865_040 0.0957789013 - - PREDICTED: crt homolog 1 isoform X2 [Jatropha curcas]
4 Hb_000291_180 0.1023678639 - - PREDICTED: meiotically up-regulated gene 185 protein [Jatropha curcas]
5 Hb_002400_320 0.1052179682 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002316_140 0.1081028275 - - PREDICTED: rac-like GTP-binding protein 3 [Populus euphratica]
7 Hb_160271_010 0.1103036406 - - PREDICTED: FAD synthase-like isoform X2 [Jatropha curcas]
8 Hb_001882_010 0.1105389877 - - -
9 Hb_001769_170 0.1114085777 - - 50S ribosomal protein L31, putative [Ricinus communis]
10 Hb_001022_030 0.1169177721 - - PREDICTED: sorting nexin 1 [Jatropha curcas]
11 Hb_000228_060 0.1204244215 - - hypothetical protein JCGZ_21532 [Jatropha curcas]
12 Hb_000539_050 0.1209370082 - - bile acid:sodium symporter, putative [Ricinus communis]
13 Hb_073973_120 0.1210667336 - - zinc finger protein, putative [Ricinus communis]
14 Hb_156850_100 0.1213194752 - - hypothetical protein CICLE_v10001788mg [Citrus clementina]
15 Hb_024184_010 0.121780163 - - PREDICTED: clustered mitochondria protein-like isoform X1 [Citrus sinensis]
16 Hb_000796_150 0.1231848493 - - PREDICTED: uncharacterized protein LOC105136996 isoform X1 [Populus euphratica]
17 Hb_000160_070 0.1265364573 - - PREDICTED: uncharacterized protein LOC105648219 [Jatropha curcas]
18 Hb_000061_180 0.1268601702 - - exonuclease, putative [Ricinus communis]
19 Hb_000359_290 0.12760221 - - Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative [Ricinus communis]
20 Hb_157023_020 0.1281060844 - - nucleic acid binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_077549_010 Hb_077549_010 Hb_029584_040 Hb_029584_040 Hb_077549_010--Hb_029584_040 Hb_174865_040 Hb_174865_040 Hb_077549_010--Hb_174865_040 Hb_000291_180 Hb_000291_180 Hb_077549_010--Hb_000291_180 Hb_002400_320 Hb_002400_320 Hb_077549_010--Hb_002400_320 Hb_002316_140 Hb_002316_140 Hb_077549_010--Hb_002316_140 Hb_160271_010 Hb_160271_010 Hb_077549_010--Hb_160271_010 Hb_029584_040--Hb_002400_320 Hb_000663_020 Hb_000663_020 Hb_029584_040--Hb_000663_020 Hb_000186_300 Hb_000186_300 Hb_029584_040--Hb_000186_300 Hb_029584_040--Hb_002316_140 Hb_000160_070 Hb_000160_070 Hb_029584_040--Hb_000160_070 Hb_156850_100 Hb_156850_100 Hb_174865_040--Hb_156850_100 Hb_042083_040 Hb_042083_040 Hb_174865_040--Hb_042083_040 Hb_174865_040--Hb_160271_010 Hb_022693_130 Hb_022693_130 Hb_174865_040--Hb_022693_130 Hb_073973_120 Hb_073973_120 Hb_174865_040--Hb_073973_120 Hb_000388_150 Hb_000388_150 Hb_174865_040--Hb_000388_150 Hb_000291_180--Hb_160271_010 Hb_001882_010 Hb_001882_010 Hb_000291_180--Hb_001882_010 Hb_048093_010 Hb_048093_010 Hb_000291_180--Hb_048093_010 Hb_000108_020 Hb_000108_020 Hb_000291_180--Hb_000108_020 Hb_000680_010 Hb_000680_010 Hb_000291_180--Hb_000680_010 Hb_068079_010 Hb_068079_010 Hb_000291_180--Hb_068079_010 Hb_008406_180 Hb_008406_180 Hb_002400_320--Hb_008406_180 Hb_005977_100 Hb_005977_100 Hb_002400_320--Hb_005977_100 Hb_000212_120 Hb_000212_120 Hb_002400_320--Hb_000212_120 Hb_005015_060 Hb_005015_060 Hb_002400_320--Hb_005015_060 Hb_004531_100 Hb_004531_100 Hb_002400_320--Hb_004531_100 Hb_000703_100 Hb_000703_100 Hb_002400_320--Hb_000703_100 Hb_002572_020 Hb_002572_020 Hb_002316_140--Hb_002572_020 Hb_010098_020 Hb_010098_020 Hb_002316_140--Hb_010098_020 Hb_014497_100 Hb_014497_100 Hb_002316_140--Hb_014497_100 Hb_000537_100 Hb_000537_100 Hb_002316_140--Hb_000537_100 Hb_001178_010 Hb_001178_010 Hb_002316_140--Hb_001178_010 Hb_073973_090 Hb_073973_090 Hb_002316_140--Hb_073973_090 Hb_160271_010--Hb_022693_130 Hb_000320_190 Hb_000320_190 Hb_160271_010--Hb_000320_190 Hb_160271_010--Hb_156850_100 Hb_002107_050 Hb_002107_050 Hb_160271_010--Hb_002107_050 Hb_160271_010--Hb_000108_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.3108 20.1708 52.6484 55.1675 17.818 30.4483
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.6281 29.5692 9.55814 10.3162 50.5449

CAGE analysis