Hb_077562_030

Information

Type -
Description -
Location Contig77562: 25136-30732
Sequence    

Annotation

kegg
ID rcu:RCOM_0621390
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012068729.1
description PREDICTED: cytochrome P450 4X1-like isoform X1 [Jatropha curcas]
swissprot
ID Q8N118
description Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2 SV=1
trembl
ID A0A067KZZ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24572 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome isoform partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57772: 25250-30578 , PASA_asmbl_57773: 25250-30657
cDNA
(Sanger)
(ID:Location)		 022_L10.ab1: 25250-26228

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_077562_030 0.0 - - PREDICTED: cytochrome P450 4X1-like isoform X1 [Jatropha curcas]
2 Hb_008147_070 0.1030013054 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
3 Hb_172632_110 0.1075406978 - - PREDICTED: pumilio homolog 5 [Jatropha curcas]
4 Hb_001761_130 0.1119577699 - - PREDICTED: uncharacterized protein LOC105646118 isoform X1 [Jatropha curcas]
5 Hb_002477_090 0.1198852563 - - PREDICTED: uncharacterized protein LOC105631409 isoform X1 [Jatropha curcas]
6 Hb_001232_010 0.1199378753 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
7 Hb_000684_290 0.1204439418 - - ubiquitin protein ligase E3a, putative [Ricinus communis]
8 Hb_000106_120 0.1220876665 - - hypothetical protein glysoja_007050 [Glycine soja]
9 Hb_109002_020 0.1234900919 - - PREDICTED: CTP synthase-like [Jatropha curcas]
10 Hb_119494_010 0.1240909962 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
11 Hb_000130_040 0.1243748566 - - PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
12 Hb_001021_080 0.1247948353 - - PREDICTED: autophagy-related protein 18a [Jatropha curcas]
13 Hb_006831_040 0.1258932119 - - PREDICTED: enhancer of mRNA-decapping protein 4-like isoform X1 [Jatropha curcas]
14 Hb_002972_020 0.1269515483 - - PREDICTED: probable ubiquitin-like-specific protease 2A isoform X1 [Jatropha curcas]
15 Hb_008864_090 0.1278544599 - - PREDICTED: plastid division protein PDV2-like [Jatropha curcas]
16 Hb_002400_410 0.1297705084 - - PREDICTED: topless-related protein 1-like [Jatropha curcas]
17 Hb_002005_100 0.1314155303 - - -
18 Hb_010021_010 0.1334679488 - - unnamed protein product [Coffea canephora]
19 Hb_004934_050 0.1351265661 - - Eukaryotic release factor 1-3 isoform 1 [Theobroma cacao]
20 Hb_000002_010 0.1353081075 - - PREDICTED: uncharacterized protein LOC105641567 [Jatropha curcas]

Gene co-expression network

sample Hb_077562_030 Hb_077562_030 Hb_008147_070 Hb_008147_070 Hb_077562_030--Hb_008147_070 Hb_172632_110 Hb_172632_110 Hb_077562_030--Hb_172632_110 Hb_001761_130 Hb_001761_130 Hb_077562_030--Hb_001761_130 Hb_002477_090 Hb_002477_090 Hb_077562_030--Hb_002477_090 Hb_001232_010 Hb_001232_010 Hb_077562_030--Hb_001232_010 Hb_000684_290 Hb_000684_290 Hb_077562_030--Hb_000684_290 Hb_001021_080 Hb_001021_080 Hb_008147_070--Hb_001021_080 Hb_119494_010 Hb_119494_010 Hb_008147_070--Hb_119494_010 Hb_109002_020 Hb_109002_020 Hb_008147_070--Hb_109002_020 Hb_002400_410 Hb_002400_410 Hb_008147_070--Hb_002400_410 Hb_008147_070--Hb_172632_110 Hb_172632_110--Hb_001761_130 Hb_006831_040 Hb_006831_040 Hb_172632_110--Hb_006831_040 Hb_010174_110 Hb_010174_110 Hb_172632_110--Hb_010174_110 Hb_172632_110--Hb_001021_080 Hb_002391_210 Hb_002391_210 Hb_172632_110--Hb_002391_210 Hb_000002_010 Hb_000002_010 Hb_172632_110--Hb_000002_010 Hb_001761_130--Hb_006831_040 Hb_017358_040 Hb_017358_040 Hb_001761_130--Hb_017358_040 Hb_001761_130--Hb_002477_090 Hb_001761_130--Hb_001232_010 Hb_001761_130--Hb_010174_110 Hb_003913_070 Hb_003913_070 Hb_002477_090--Hb_003913_070 Hb_004934_050 Hb_004934_050 Hb_002477_090--Hb_004934_050 Hb_001123_050 Hb_001123_050 Hb_002477_090--Hb_001123_050 Hb_000106_120 Hb_000106_120 Hb_002477_090--Hb_000106_120 Hb_003058_060 Hb_003058_060 Hb_002477_090--Hb_003058_060 Hb_003647_130 Hb_003647_130 Hb_001232_010--Hb_003647_130 Hb_002217_030 Hb_002217_030 Hb_001232_010--Hb_002217_030 Hb_001157_090 Hb_001157_090 Hb_001232_010--Hb_001157_090 Hb_001232_010--Hb_002477_090 Hb_143629_110 Hb_143629_110 Hb_001232_010--Hb_143629_110 Hb_002005_080 Hb_002005_080 Hb_000684_290--Hb_002005_080 Hb_000684_290--Hb_017358_040 Hb_000340_490 Hb_000340_490 Hb_000684_290--Hb_000340_490 Hb_000684_290--Hb_000106_120 Hb_000684_290--Hb_002477_090 Hb_000684_290--Hb_001761_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.71237 17.6221 4.0883 9.75102 16.5519 15.4292
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.7405 17.811 15.7838 40.2169 11.2696

CAGE analysis