Hb_077562_040

Information

Type -
Description -
Location Contig77562: 31484-32736
Sequence    

Annotation

kegg
ID rcu:RCOM_0621400
description cysteine protease inhibitor, putative
nr
ID KDP40574.1
description hypothetical protein JCGZ_24573 [Jatropha curcas]
swissprot
ID Q0JNR2
description Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1
trembl
ID A0A067L8Z5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24573 PE=4 SV=1
Gene Ontology
ID GO:0044444
description cysteine proteinase inhibitor 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57772: 25250-30578 , PASA_asmbl_57773: 25250-30657 , PASA_asmbl_57774: 31582-32952 , PASA_asmbl_57775: 31524-32240
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_077562_040 0.0 - - hypothetical protein JCGZ_24573 [Jatropha curcas]
2 Hb_000184_120 0.1010182444 - - hypothetical protein JCGZ_18526 [Jatropha curcas]
3 Hb_023675_010 0.101961669 - - -
4 Hb_004025_030 0.1106599153 - - -
5 Hb_000563_530 0.1179800071 - - PREDICTED: uncharacterized protein LOC105643453 [Jatropha curcas]
6 Hb_000366_100 0.1268205037 - - 60S ribosomal protein L7aA [Hevea brasiliensis]
7 Hb_001488_110 0.1373349355 - - -
8 Hb_170305_020 0.139332696 - - hypothetical protein JCGZ_23578 [Jatropha curcas]
9 Hb_033448_010 0.1406066552 - - hypothetical protein JCGZ_19772 [Jatropha curcas]
10 Hb_002200_120 0.1444375247 - - conserved hypothetical protein [Ricinus communis]
11 Hb_027445_060 0.1453415505 - - PREDICTED: pescadillo homolog isoform X1 [Jatropha curcas]
12 Hb_000603_220 0.1511525091 - - PREDICTED: MADS-box transcription factor 23 [Jatropha curcas]
13 Hb_036369_010 0.1549971935 - - -
14 Hb_004852_020 0.1558101907 - - -
15 Hb_000914_060 0.1577469747 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor PLT1 [Populus euphratica]
16 Hb_178345_010 0.1619866136 - - hypothetical protein PHAVU_004G084200g [Phaseolus vulgaris]
17 Hb_003327_060 0.1647868822 - - PREDICTED: uncharacterized protein LOC105645303 isoform X1 [Jatropha curcas]
18 Hb_012395_100 0.1655412881 - - eukaryotic translation initiation factor 4e, putative [Ricinus communis]
19 Hb_007317_220 0.1663125482 - - hypothetical protein JCGZ_12701 [Jatropha curcas]
20 Hb_004968_060 0.1679178064 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_077562_040 Hb_077562_040 Hb_000184_120 Hb_000184_120 Hb_077562_040--Hb_000184_120 Hb_023675_010 Hb_023675_010 Hb_077562_040--Hb_023675_010 Hb_004025_030 Hb_004025_030 Hb_077562_040--Hb_004025_030 Hb_000563_530 Hb_000563_530 Hb_077562_040--Hb_000563_530 Hb_000366_100 Hb_000366_100 Hb_077562_040--Hb_000366_100 Hb_001488_110 Hb_001488_110 Hb_077562_040--Hb_001488_110 Hb_002200_120 Hb_002200_120 Hb_000184_120--Hb_002200_120 Hb_000184_120--Hb_000563_530 Hb_033448_010 Hb_033448_010 Hb_000184_120--Hb_033448_010 Hb_000184_120--Hb_004025_030 Hb_000369_090 Hb_000369_090 Hb_000184_120--Hb_000369_090 Hb_023675_010--Hb_000366_100 Hb_036369_010 Hb_036369_010 Hb_023675_010--Hb_036369_010 Hb_004852_020 Hb_004852_020 Hb_023675_010--Hb_004852_020 Hb_001248_020 Hb_001248_020 Hb_023675_010--Hb_001248_020 Hb_012395_100 Hb_012395_100 Hb_023675_010--Hb_012395_100 Hb_004025_030--Hb_023675_010 Hb_004025_030--Hb_000563_530 Hb_004375_060 Hb_004375_060 Hb_004025_030--Hb_004375_060 Hb_027445_060 Hb_027445_060 Hb_004025_030--Hb_027445_060 Hb_000563_530--Hb_033448_010 Hb_000563_530--Hb_002200_120 Hb_000563_530--Hb_000369_090 Hb_000563_530--Hb_000366_100 Hb_000189_530 Hb_000189_530 Hb_000366_100--Hb_000189_530 Hb_000366_100--Hb_036369_010 Hb_000752_060 Hb_000752_060 Hb_000366_100--Hb_000752_060 Hb_000617_320 Hb_000617_320 Hb_000366_100--Hb_000617_320 Hb_008016_010 Hb_008016_010 Hb_000366_100--Hb_008016_010 Hb_001488_110--Hb_027445_060 Hb_001488_110--Hb_000184_120 Hb_068946_010 Hb_068946_010 Hb_001488_110--Hb_068946_010 Hb_001488_110--Hb_004025_030 Hb_001488_110--Hb_000563_530
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.66483 0.363021 0.121235 0.113457 5.94969 10.8976
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.4246 7.32011 1.2753 0.841714 0

CAGE analysis