Hb_078448_010

Information

Type -
Description -
Location Contig78448: 1280-2484
Sequence    

Annotation

kegg
ID cit:102624407
description protein YLS7-like
nr
ID XP_010093465.1
description hypothetical protein L484_017526 [Morus notabilis]
swissprot
ID F4IWA8
description Protein trichome birefringence-like 41 OS=Arabidopsis thaliana GN=TBL41 PE=2 SV=1
trembl
ID W9RFY0
description Uncharacterized protein OS=Morus notabilis GN=L484_017526 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_078448_010 0.0 - - hypothetical protein L484_017526 [Morus notabilis]
2 Hb_005398_050 0.0805019877 - - PREDICTED: uncharacterized protein LOC105644215 isoform X1 [Jatropha curcas]
3 Hb_006573_310 0.0866190135 - - Tellurite resistance protein tehA, putative [Ricinus communis]
4 Hb_000527_020 0.0976811184 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
5 Hb_000056_290 0.1023877305 - - conserved hypothetical protein [Ricinus communis]
6 Hb_118282_020 0.1024998329 - - PREDICTED: uncharacterized protein LOC105631532 isoform X3 [Jatropha curcas]
7 Hb_004774_080 0.1069718897 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002836_110 0.1094864731 transcription factor TF Family: TUB PREDICTED: tubby-like protein 8 [Jatropha curcas]
9 Hb_016898_020 0.1108454156 transcription factor TF Family: SET PREDICTED: uncharacterized protein LOC105120899 [Populus euphratica]
10 Hb_001329_050 0.1110305769 - - conserved hypothetical protein [Ricinus communis]
11 Hb_007245_030 0.1182193309 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000890_140 0.1198563285 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
13 Hb_000116_050 0.122111633 - - PREDICTED: G2/mitotic-specific cyclin-2-like isoform X2 [Jatropha curcas]
14 Hb_009113_060 0.1226420157 - - conserved hypothetical protein [Ricinus communis]
15 Hb_021576_050 0.1228507252 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
16 Hb_000856_390 0.1229515622 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003847_060 0.1262044247 - - syntaxin, putative [Ricinus communis]
18 Hb_002053_100 0.1287704154 - - actin binding protein, putative [Ricinus communis]
19 Hb_004225_160 0.1288914503 - - PREDICTED: kiwellin-like [Jatropha curcas]
20 Hb_001307_150 0.129450524 - - receptor protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_078448_010 Hb_078448_010 Hb_005398_050 Hb_005398_050 Hb_078448_010--Hb_005398_050 Hb_006573_310 Hb_006573_310 Hb_078448_010--Hb_006573_310 Hb_000527_020 Hb_000527_020 Hb_078448_010--Hb_000527_020 Hb_000056_290 Hb_000056_290 Hb_078448_010--Hb_000056_290 Hb_118282_020 Hb_118282_020 Hb_078448_010--Hb_118282_020 Hb_004774_080 Hb_004774_080 Hb_078448_010--Hb_004774_080 Hb_003847_060 Hb_003847_060 Hb_005398_050--Hb_003847_060 Hb_005398_050--Hb_000527_020 Hb_000035_230 Hb_000035_230 Hb_005398_050--Hb_000035_230 Hb_001307_150 Hb_001307_150 Hb_005398_050--Hb_001307_150 Hb_016898_020 Hb_016898_020 Hb_005398_050--Hb_016898_020 Hb_006573_310--Hb_004774_080 Hb_007245_030 Hb_007245_030 Hb_006573_310--Hb_007245_030 Hb_005914_100 Hb_005914_100 Hb_006573_310--Hb_005914_100 Hb_004241_160 Hb_004241_160 Hb_006573_310--Hb_004241_160 Hb_006573_310--Hb_000527_020 Hb_000890_140 Hb_000890_140 Hb_000527_020--Hb_000890_140 Hb_128392_010 Hb_128392_010 Hb_000527_020--Hb_128392_010 Hb_021576_050 Hb_021576_050 Hb_000527_020--Hb_021576_050 Hb_001390_040 Hb_001390_040 Hb_000527_020--Hb_001390_040 Hb_001329_050 Hb_001329_050 Hb_000056_290--Hb_001329_050 Hb_120289_010 Hb_120289_010 Hb_000056_290--Hb_120289_010 Hb_000056_290--Hb_006573_310 Hb_000933_040 Hb_000933_040 Hb_000056_290--Hb_000933_040 Hb_000056_290--Hb_000527_020 Hb_118282_020--Hb_004774_080 Hb_118282_020--Hb_000527_020 Hb_118282_020--Hb_005398_050 Hb_000418_040 Hb_000418_040 Hb_118282_020--Hb_000418_040 Hb_007474_020 Hb_007474_020 Hb_118282_020--Hb_007474_020 Hb_118282_020--Hb_001307_150 Hb_000134_300 Hb_000134_300 Hb_004774_080--Hb_000134_300 Hb_003680_180 Hb_003680_180 Hb_004774_080--Hb_003680_180 Hb_034420_010 Hb_034420_010 Hb_004774_080--Hb_034420_010 Hb_004774_080--Hb_000527_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0903684 2.51679 1.76021 0.0414558 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0661105 0.155639

CAGE analysis