Hb_078901_020

Information

Type -
Description -
Location Contig78901: 14244-14838
Sequence    

Annotation

kegg
ID rcu:RCOM_0489120
description phosphatidylethanolamine binding protein, putative
nr
ID XP_012089808.1
description PREDICTED: uncharacterized protein LOC105648117 [Jatropha curcas]
swissprot
ID O26373
description UPF0098 protein MTH_273 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_273 PE=3 SV=1
trembl
ID A0A067JJ72
description Phosphatidyl ethanolamine binding protein-like protein OS=Jatropha curcas GN=PEBPL PE=2 SV=1
Gene Ontology
ID GO:0010162
description phosphatidylethanolamine binding

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_078901_020 0.0 - - PREDICTED: uncharacterized protein LOC105648117 [Jatropha curcas]
2 Hb_001303_070 0.1712262782 - - PREDICTED: dnaJ homolog subfamily C GRV2 isoform X2 [Prunus mume]
3 Hb_184746_010 0.2040761419 - - HSP20-like chaperones superfamily protein [Theobroma cacao]
4 Hb_118014_010 0.2659244875 - - PREDICTED: uncharacterized protein LOC104214283 [Nicotiana sylvestris]
5 Hb_027380_250 0.2845221547 - - Isoflavone reductase, putative [Ricinus communis]
6 Hb_000045_060 0.3124866872 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_007193_050 0.3307483126 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
8 Hb_089341_010 0.3308570726 - - Uncharacterized protein TCM_018339 [Theobroma cacao]
9 Hb_137515_010 0.3574209091 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X1 [Populus euphratica]
10 Hb_061365_010 0.3584278994 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
11 Hb_007257_010 0.3595901416 - - cytosolic class II low molecular weight heat shock protein [Prunus dulcis]
12 Hb_010997_100 0.3610201745 transcription factor TF Family: mTERF -
13 Hb_006040_040 0.3697987938 - - Putative mitochondrial protein [Glycine soja]
14 Hb_002235_290 0.3742168004 - - PREDICTED: casparian strip membrane protein 5 [Jatropha curcas]
15 Hb_020247_050 0.376625703 - - PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica]
16 Hb_119886_040 0.3771740326 - - -
17 Hb_062741_010 0.3783427294 - - -
18 Hb_012395_080 0.3811622772 - - PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Jatropha curcas]
19 Hb_002426_010 0.3824356166 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
20 Hb_006634_010 0.3827536456 - - -

Gene co-expression network

sample Hb_078901_020 Hb_078901_020 Hb_001303_070 Hb_001303_070 Hb_078901_020--Hb_001303_070 Hb_184746_010 Hb_184746_010 Hb_078901_020--Hb_184746_010 Hb_118014_010 Hb_118014_010 Hb_078901_020--Hb_118014_010 Hb_027380_250 Hb_027380_250 Hb_078901_020--Hb_027380_250 Hb_000045_060 Hb_000045_060 Hb_078901_020--Hb_000045_060 Hb_007193_050 Hb_007193_050 Hb_078901_020--Hb_007193_050 Hb_001303_070--Hb_184746_010 Hb_089341_010 Hb_089341_010 Hb_001303_070--Hb_089341_010 Hb_002426_010 Hb_002426_010 Hb_001303_070--Hb_002426_010 Hb_000318_240 Hb_000318_240 Hb_001303_070--Hb_000318_240 Hb_002003_110 Hb_002003_110 Hb_001303_070--Hb_002003_110 Hb_020469_010 Hb_020469_010 Hb_184746_010--Hb_020469_010 Hb_183574_010 Hb_183574_010 Hb_184746_010--Hb_183574_010 Hb_004449_240 Hb_004449_240 Hb_184746_010--Hb_004449_240 Hb_062741_010 Hb_062741_010 Hb_184746_010--Hb_062741_010 Hb_118014_010--Hb_027380_250 Hb_118014_010--Hb_000045_060 Hb_118014_010--Hb_007193_050 Hb_004981_010 Hb_004981_010 Hb_118014_010--Hb_004981_010 Hb_001758_030 Hb_001758_030 Hb_118014_010--Hb_001758_030 Hb_027380_250--Hb_007193_050 Hb_027380_250--Hb_000045_060 Hb_132317_010 Hb_132317_010 Hb_027380_250--Hb_132317_010 Hb_001021_050 Hb_001021_050 Hb_027380_250--Hb_001021_050 Hb_000045_060--Hb_007193_050 Hb_065661_010 Hb_065661_010 Hb_000045_060--Hb_065661_010 Hb_000045_060--Hb_004981_010 Hb_003717_020 Hb_003717_020 Hb_000045_060--Hb_003717_020 Hb_007193_050--Hb_132317_010 Hb_024468_040 Hb_024468_040 Hb_007193_050--Hb_024468_040 Hb_133047_030 Hb_133047_030 Hb_007193_050--Hb_133047_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.437381 0.136256 0 0.434191 0.880738
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.396479

CAGE analysis