Hb_078954_020

Information

Type -
Description -
Location Contig78954: 6372-7218
Sequence    

Annotation

kegg
ID rcu:RCOM_0841690
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_012092524.1
description PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
swissprot
ID P37122
description Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1
trembl
ID A0A067JCP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05069 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 76a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 040_O22.ab1: 7685-8152

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_078954_020 0.0 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
2 Hb_000282_010 0.0504987819 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001218_060 0.0731610555 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001123_340 0.094921909 - - PREDICTED: uncharacterized protein LOC105123089 isoform X1 [Populus euphratica]
5 Hb_001926_010 0.0977139634 - - hypothetical protein Csa_2G383910 [Cucumis sativus]
6 Hb_000152_200 0.1198617205 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL2 isoform X1 [Jatropha curcas]
7 Hb_063584_010 0.1206013579 - - hypothetical protein JCGZ_10530 [Jatropha curcas]
8 Hb_000731_030 0.1213122298 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
9 Hb_007681_020 0.1243664208 - - transferase, putative [Ricinus communis]
10 Hb_088118_010 0.1246767686 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
11 Hb_177533_010 0.1247672196 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
12 Hb_000505_030 0.1252742014 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001921_040 0.1274298796 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
14 Hb_012084_010 0.1288070886 - - cold regulated protein [Manihot esculenta]
15 Hb_005198_010 0.1296057911 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 5 [Jatropha curcas]
16 Hb_003964_050 0.1315862778 transcription factor TF Family: NAC PREDICTED: NAC transcription factor 25-like [Jatropha curcas]
17 Hb_002079_100 0.1332305073 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG5 [Jatropha curcas]
18 Hb_000556_050 0.1344294037 - - -
19 Hb_005511_080 0.1357461835 - - Protein MLO, putative [Ricinus communis]
20 Hb_012633_010 0.1371388883 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 49 [Jatropha curcas]

Gene co-expression network

sample Hb_078954_020 Hb_078954_020 Hb_000282_010 Hb_000282_010 Hb_078954_020--Hb_000282_010 Hb_001218_060 Hb_001218_060 Hb_078954_020--Hb_001218_060 Hb_001123_340 Hb_001123_340 Hb_078954_020--Hb_001123_340 Hb_001926_010 Hb_001926_010 Hb_078954_020--Hb_001926_010 Hb_000152_200 Hb_000152_200 Hb_078954_020--Hb_000152_200 Hb_063584_010 Hb_063584_010 Hb_078954_020--Hb_063584_010 Hb_000282_010--Hb_001218_060 Hb_000282_010--Hb_001926_010 Hb_000282_010--Hb_001123_340 Hb_001921_040 Hb_001921_040 Hb_000282_010--Hb_001921_040 Hb_088118_010 Hb_088118_010 Hb_000282_010--Hb_088118_010 Hb_001218_060--Hb_001123_340 Hb_005511_080 Hb_005511_080 Hb_001218_060--Hb_005511_080 Hb_012084_010 Hb_012084_010 Hb_001218_060--Hb_012084_010 Hb_003077_010 Hb_003077_010 Hb_001218_060--Hb_003077_010 Hb_001123_340--Hb_001926_010 Hb_089736_010 Hb_089736_010 Hb_001123_340--Hb_089736_010 Hb_000187_100 Hb_000187_100 Hb_001123_340--Hb_000187_100 Hb_000264_160 Hb_000264_160 Hb_001123_340--Hb_000264_160 Hb_001926_010--Hb_001921_040 Hb_002235_260 Hb_002235_260 Hb_001926_010--Hb_002235_260 Hb_019762_030 Hb_019762_030 Hb_001926_010--Hb_019762_030 Hb_004117_060 Hb_004117_060 Hb_001926_010--Hb_004117_060 Hb_000005_160 Hb_000005_160 Hb_000152_200--Hb_000005_160 Hb_177533_010 Hb_177533_010 Hb_000152_200--Hb_177533_010 Hb_007741_010 Hb_007741_010 Hb_000152_200--Hb_007741_010 Hb_000544_150 Hb_000544_150 Hb_000152_200--Hb_000544_150 Hb_000556_050 Hb_000556_050 Hb_000152_200--Hb_000556_050 Hb_005198_010 Hb_005198_010 Hb_000152_200--Hb_005198_010 Hb_000853_340 Hb_000853_340 Hb_063584_010--Hb_000853_340 Hb_155874_020 Hb_155874_020 Hb_063584_010--Hb_155874_020 Hb_063584_010--Hb_019762_030 Hb_000173_330 Hb_000173_330 Hb_063584_010--Hb_000173_330 Hb_132840_060 Hb_132840_060 Hb_063584_010--Hb_132840_060 Hb_017358_060 Hb_017358_060 Hb_063584_010--Hb_017358_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.1774 4.21561 0.236147 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.504078

CAGE analysis