Hb_079158_010

Information

Type -
Description -
Location Contig79158: 3543-4149
Sequence    

Annotation

kegg
ID pop:POPTR_0005s21140g
description POPTRDRAFT_559346; hypothetical protein
nr
ID XP_012066059.1
description PREDICTED: sperm acrosomal protein FSA-ACR.1-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LET5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25216 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_079158_010 0.0 - - PREDICTED: sperm acrosomal protein FSA-ACR.1-like [Jatropha curcas]
2 Hb_000203_060 0.1556208497 transcription factor TF Family: G2-like hypothetical protein POPTR_0004s05660g [Populus trichocarpa]
3 Hb_124385_010 0.1563646754 - - hypothetical protein JCGZ_13882 [Jatropha curcas]
4 Hb_002157_180 0.1563733493 - - separase, putative [Ricinus communis]
5 Hb_008111_020 0.1598866902 - - Receptor like protein 6, putative [Theobroma cacao]
6 Hb_000343_280 0.1635654078 - - hypothetical protein JCGZ_24094 [Jatropha curcas]
7 Hb_120268_010 0.1655252753 - - PREDICTED: chitin elicitor receptor kinase 1-like isoform X3 [Populus euphratica]
8 Hb_002269_030 0.1677629821 - - hypothetical protein CISIN_1g018400mg [Citrus sinensis]
9 Hb_001709_070 0.1734727131 - - carbohydrate binding protein, putative [Ricinus communis]
10 Hb_047923_010 0.1750430317 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
11 Hb_003752_130 0.1752264774 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
12 Hb_001652_050 0.1753316473 - - -
13 Hb_006106_020 0.1815120121 - - ring finger protein, putative [Ricinus communis]
14 Hb_136546_010 0.1842466385 - - PREDICTED: wall-associated receptor kinase-like 1, partial [Populus euphratica]
15 Hb_000613_270 0.1850251478 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
16 Hb_023774_010 0.1852560223 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
17 Hb_004162_040 0.1852690748 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Crassostrea gigas]
18 Hb_002171_070 0.1859187509 desease resistance Gene Name: NB-ARC NBS-LRR resistance gene-like protein ARGH30 [Populus trichocarpa]
19 Hb_001769_030 0.1865238232 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
20 Hb_001427_220 0.1870645025 - - hypothetical protein CISIN_1g033375mg [Citrus sinensis]

Gene co-expression network

sample Hb_079158_010 Hb_079158_010 Hb_000203_060 Hb_000203_060 Hb_079158_010--Hb_000203_060 Hb_124385_010 Hb_124385_010 Hb_079158_010--Hb_124385_010 Hb_002157_180 Hb_002157_180 Hb_079158_010--Hb_002157_180 Hb_008111_020 Hb_008111_020 Hb_079158_010--Hb_008111_020 Hb_000343_280 Hb_000343_280 Hb_079158_010--Hb_000343_280 Hb_120268_010 Hb_120268_010 Hb_079158_010--Hb_120268_010 Hb_000203_060--Hb_120268_010 Hb_004162_040 Hb_004162_040 Hb_000203_060--Hb_004162_040 Hb_148121_030 Hb_148121_030 Hb_000203_060--Hb_148121_030 Hb_001709_070 Hb_001709_070 Hb_000203_060--Hb_001709_070 Hb_001623_470 Hb_001623_470 Hb_000203_060--Hb_001623_470 Hb_001769_030 Hb_001769_030 Hb_000203_060--Hb_001769_030 Hb_124385_010--Hb_001709_070 Hb_124385_010--Hb_004162_040 Hb_001856_060 Hb_001856_060 Hb_124385_010--Hb_001856_060 Hb_001013_040 Hb_001013_040 Hb_124385_010--Hb_001013_040 Hb_029508_030 Hb_029508_030 Hb_124385_010--Hb_029508_030 Hb_008503_020 Hb_008503_020 Hb_124385_010--Hb_008503_020 Hb_002157_180--Hb_008111_020 Hb_001652_050 Hb_001652_050 Hb_002157_180--Hb_001652_050 Hb_047923_010 Hb_047923_010 Hb_002157_180--Hb_047923_010 Hb_157122_010 Hb_157122_010 Hb_002157_180--Hb_157122_010 Hb_003752_130 Hb_003752_130 Hb_002157_180--Hb_003752_130 Hb_003085_050 Hb_003085_050 Hb_002157_180--Hb_003085_050 Hb_008111_020--Hb_003752_130 Hb_008111_020--Hb_047923_010 Hb_008111_020--Hb_001652_050 Hb_000613_270 Hb_000613_270 Hb_008111_020--Hb_000613_270 Hb_000059_290 Hb_000059_290 Hb_008111_020--Hb_000059_290 Hb_005306_040 Hb_005306_040 Hb_000343_280--Hb_005306_040 Hb_000343_280--Hb_008111_020 Hb_100873_040 Hb_100873_040 Hb_000343_280--Hb_100873_040 Hb_000512_080 Hb_000512_080 Hb_000343_280--Hb_000512_080 Hb_000343_280--Hb_000059_290 Hb_000408_010 Hb_000408_010 Hb_000343_280--Hb_000408_010 Hb_120268_010--Hb_004162_040 Hb_120268_010--Hb_148121_030 Hb_120268_010--Hb_001709_070 Hb_120268_010--Hb_001769_030 Hb_120268_010--Hb_124385_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.40165 0.643374 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.716 0.18604

CAGE analysis