Hb_080147_050

Information

Type -
Description -
Location Contig80147: 33908-41564
Sequence    

Annotation

kegg
ID rcu:RCOM_1052190
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012076727.1
description PREDICTED: probable plastidic glucose transporter 2 [Jatropha curcas]
swissprot
ID Q9FYG3
description Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1
trembl
ID A0A067KBU5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07267 PE=3 SV=1
Gene Ontology
ID GO:0016021
description probable plastidic glucose transporter 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58809: 33961-38303 , PASA_asmbl_58810: 33876-41510 , PASA_asmbl_58811: 39911-40162 , PASA_asmbl_58812: 38547-40883
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_080147_050 0.0 - - PREDICTED: probable plastidic glucose transporter 2 [Jatropha curcas]
2 Hb_020805_180 0.0651657818 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
3 Hb_000321_090 0.0658122308 - - PREDICTED: calcium-transporting ATPase 1, endoplasmic reticulum-type-like [Jatropha curcas]
4 Hb_000834_230 0.0717538248 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
5 Hb_000787_200 0.0730975036 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
6 Hb_158845_060 0.0739148172 - - PREDICTED: nudix hydrolase 3 isoform X1 [Jatropha curcas]
7 Hb_007245_020 0.0741584811 - - PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Populus euphratica]
8 Hb_001587_030 0.0776403485 - - hypothetical protein JCGZ_09892 [Jatropha curcas]
9 Hb_006478_030 0.0778366845 - - hypothetical protein POPTR_0005s23510g [Populus trichocarpa]
10 Hb_000342_050 0.0810501028 - - hypothetical protein POPTR_0006s24710g [Populus trichocarpa]
11 Hb_000599_360 0.0812738254 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
12 Hb_160608_010 0.0823935535 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1 [Populus euphratica]
13 Hb_000009_030 0.0827069139 - - PREDICTED: splicing factor U2af large subunit B isoform X1 [Jatropha curcas]
14 Hb_000157_070 0.0853091348 - - PREDICTED: alpha-N-acetylglucosaminidase [Jatropha curcas]
15 Hb_000976_110 0.0862761331 - - PREDICTED: KRR1 small subunit processome component homolog [Jatropha curcas]
16 Hb_000649_060 0.086773073 - - PREDICTED: E3 ubiquitin protein ligase RIE1 [Jatropha curcas]
17 Hb_019840_030 0.0886295285 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
18 Hb_005074_020 0.089844253 - - PREDICTED: uncharacterized protein LOC105644455 isoform X1 [Jatropha curcas]
19 Hb_002357_070 0.0902718924 transcription factor TF Family: PHD PREDICTED: protein strawberry notch homolog 1 [Jatropha curcas]
20 Hb_000318_150 0.090425998 - - RNA-binding protein Nova-1, putative [Ricinus communis]

Gene co-expression network

sample Hb_080147_050 Hb_080147_050 Hb_020805_180 Hb_020805_180 Hb_080147_050--Hb_020805_180 Hb_000321_090 Hb_000321_090 Hb_080147_050--Hb_000321_090 Hb_000834_230 Hb_000834_230 Hb_080147_050--Hb_000834_230 Hb_000787_200 Hb_000787_200 Hb_080147_050--Hb_000787_200 Hb_158845_060 Hb_158845_060 Hb_080147_050--Hb_158845_060 Hb_007245_020 Hb_007245_020 Hb_080147_050--Hb_007245_020 Hb_020805_180--Hb_000321_090 Hb_002851_010 Hb_002851_010 Hb_020805_180--Hb_002851_010 Hb_000649_060 Hb_000649_060 Hb_020805_180--Hb_000649_060 Hb_000157_070 Hb_000157_070 Hb_020805_180--Hb_000157_070 Hb_002027_190 Hb_002027_190 Hb_020805_180--Hb_002027_190 Hb_000080_110 Hb_000080_110 Hb_000321_090--Hb_000080_110 Hb_000321_090--Hb_002027_190 Hb_000049_250 Hb_000049_250 Hb_000321_090--Hb_000049_250 Hb_001322_180 Hb_001322_180 Hb_000321_090--Hb_001322_180 Hb_000834_230--Hb_000787_200 Hb_000834_230--Hb_000321_090 Hb_000834_230--Hb_000049_250 Hb_000220_120 Hb_000220_120 Hb_000834_230--Hb_000220_120 Hb_000834_230--Hb_001322_180 Hb_000318_150 Hb_000318_150 Hb_000787_200--Hb_000318_150 Hb_011674_040 Hb_011674_040 Hb_000787_200--Hb_011674_040 Hb_000342_050 Hb_000342_050 Hb_000787_200--Hb_000342_050 Hb_000270_170 Hb_000270_170 Hb_000787_200--Hb_000270_170 Hb_003964_110 Hb_003964_110 Hb_158845_060--Hb_003964_110 Hb_000599_360 Hb_000599_360 Hb_158845_060--Hb_000599_360 Hb_000297_030 Hb_000297_030 Hb_158845_060--Hb_000297_030 Hb_001085_080 Hb_001085_080 Hb_158845_060--Hb_001085_080 Hb_021977_010 Hb_021977_010 Hb_158845_060--Hb_021977_010 Hb_002357_070 Hb_002357_070 Hb_007245_020--Hb_002357_070 Hb_123531_010 Hb_123531_010 Hb_007245_020--Hb_123531_010 Hb_006478_030 Hb_006478_030 Hb_007245_020--Hb_006478_030 Hb_000172_340 Hb_000172_340 Hb_007245_020--Hb_000172_340 Hb_060980_010 Hb_060980_010 Hb_007245_020--Hb_060980_010 Hb_000103_290 Hb_000103_290 Hb_007245_020--Hb_000103_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.1656 27.8142 27.1124 29.9634 15.9983 14.1359
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.63184 9.02083 10.0069 43.8643 32.9044

CAGE analysis