Hb_080530_020

Information

Type -
Description -
Location Contig80530: 8965-11812
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_080530_020 0.0 - - -
2 Hb_000953_060 0.1505103172 - - PREDICTED: putative phytosulfokines 6 [Vitis vinifera]
3 Hb_000211_070 0.1685623918 - - isoleucyl tRNA synthetase, putative [Ricinus communis]
4 Hb_000213_060 0.1701172462 - - PREDICTED: RRP12-like protein isoform X1 [Jatropha curcas]
5 Hb_000270_500 0.1776334368 - - PREDICTED: uncharacterized protein LOC105640439 [Jatropha curcas]
6 Hb_006901_040 0.1846049537 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005016_150 0.1887523386 - - -
8 Hb_181320_010 0.1962890239 - - PREDICTED: signal recognition particle 14 kDa protein [Jatropha curcas]
9 Hb_000466_060 0.2055297388 - - phosphofructokinase [Hevea brasiliensis]
10 Hb_004206_040 0.2067263699 - - cytochrome P450, putative [Ricinus communis]
11 Hb_003859_010 0.2069992844 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
12 Hb_176117_010 0.2077456285 - - Cold-inducible RNA-binding protein [Morus notabilis]
13 Hb_010189_010 0.2078778878 - - -
14 Hb_000248_050 0.2102860435 - - PREDICTED: uncharacterized protein LOC105647198 isoform X3 [Jatropha curcas]
15 Hb_000189_420 0.2160236524 - - PREDICTED: uncharacterized protein LOC105647665 [Jatropha curcas]
16 Hb_001252_170 0.2179622372 desease resistance Gene Name: Exostosin hypothetical protein PRUPE_ppa001357mg [Prunus persica]
17 Hb_174865_050 0.218363495 - - PREDICTED: neuroguidin [Jatropha curcas]
18 Hb_025048_040 0.2194569982 - - PREDICTED: NAP1-related protein 2 [Jatropha curcas]
19 Hb_005217_020 0.22319141 - - PREDICTED: ribosomal RNA processing protein 36 homolog isoform X2 [Jatropha curcas]
20 Hb_001523_010 0.2239915245 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_25496 [Jatropha curcas]

Gene co-expression network

sample Hb_080530_020 Hb_080530_020 Hb_000953_060 Hb_000953_060 Hb_080530_020--Hb_000953_060 Hb_000211_070 Hb_000211_070 Hb_080530_020--Hb_000211_070 Hb_000213_060 Hb_000213_060 Hb_080530_020--Hb_000213_060 Hb_000270_500 Hb_000270_500 Hb_080530_020--Hb_000270_500 Hb_006901_040 Hb_006901_040 Hb_080530_020--Hb_006901_040 Hb_005016_150 Hb_005016_150 Hb_080530_020--Hb_005016_150 Hb_181320_010 Hb_181320_010 Hb_000953_060--Hb_181320_010 Hb_000861_030 Hb_000861_030 Hb_000953_060--Hb_000861_030 Hb_176117_010 Hb_176117_010 Hb_000953_060--Hb_176117_010 Hb_000122_140 Hb_000122_140 Hb_000953_060--Hb_000122_140 Hb_000953_060--Hb_005016_150 Hb_000890_220 Hb_000890_220 Hb_000211_070--Hb_000890_220 Hb_000211_070--Hb_006901_040 Hb_000211_070--Hb_000213_060 Hb_000779_040 Hb_000779_040 Hb_000211_070--Hb_000779_040 Hb_000787_100 Hb_000787_100 Hb_000211_070--Hb_000787_100 Hb_004206_040 Hb_004206_040 Hb_000211_070--Hb_004206_040 Hb_010189_010 Hb_010189_010 Hb_000213_060--Hb_010189_010 Hb_113216_010 Hb_113216_010 Hb_000213_060--Hb_113216_010 Hb_000016_180 Hb_000016_180 Hb_000213_060--Hb_000016_180 Hb_000185_090 Hb_000185_090 Hb_000213_060--Hb_000185_090 Hb_000466_060 Hb_000466_060 Hb_000213_060--Hb_000466_060 Hb_002918_070 Hb_002918_070 Hb_000213_060--Hb_002918_070 Hb_000270_500--Hb_176117_010 Hb_000270_500--Hb_181320_010 Hb_094647_010 Hb_094647_010 Hb_000270_500--Hb_094647_010 Hb_000270_500--Hb_005016_150 Hb_007827_020 Hb_007827_020 Hb_000270_500--Hb_007827_020 Hb_000212_280 Hb_000212_280 Hb_006901_040--Hb_000212_280 Hb_006901_040--Hb_113216_010 Hb_002675_190 Hb_002675_190 Hb_006901_040--Hb_002675_190 Hb_006901_040--Hb_000016_180 Hb_006901_040--Hb_000213_060 Hb_174865_050 Hb_174865_050 Hb_006901_040--Hb_174865_050 Hb_001675_060 Hb_001675_060 Hb_005016_150--Hb_001675_060 Hb_005016_150--Hb_000213_060 Hb_001477_010 Hb_001477_010 Hb_005016_150--Hb_001477_010 Hb_005016_150--Hb_181320_010 Hb_003226_170 Hb_003226_170 Hb_005016_150--Hb_003226_170 Hb_000256_270 Hb_000256_270 Hb_005016_150--Hb_000256_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.80161 0.351357 0.190063 0 1.85078 5.32763
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.56076 0.69275 0.112464 0.973403 0.124664

CAGE analysis