Hb_080873_010

Information

Type -
Description -
Location Contig80873: 11-205
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_080873_010 0.0 - - -
2 Hb_000892_040 0.0562361609 - - -
3 Hb_002092_140 0.0892908667 - - hypothetical protein EUGRSUZ_B00708, partial [Eucalyptus grandis]
4 Hb_166828_010 0.1056467037 - - -
5 Hb_000002_280 0.1414719896 - - PREDICTED: two-pore potassium channel 1 [Jatropha curcas]
6 Hb_002284_040 0.1452872766 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
7 Hb_000501_180 0.1720299817 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 [Jatropha curcas]
8 Hb_002221_020 0.1742852869 - - hypothetical protein B456_008G083700 [Gossypium raimondii]
9 Hb_007590_040 0.1800159792 - - PREDICTED: vacuolar cation/proton exchanger 3-like [Jatropha curcas]
10 Hb_000320_170 0.1803121412 - - conserved hypothetical protein [Ricinus communis]
11 Hb_006717_020 0.1810397417 - - calcium-dependent protein kinase [Hevea brasiliensis]
12 Hb_000300_240 0.1811508911 - - Sodium/potassium/calcium exchanger 6 precursor, putative [Ricinus communis]
13 Hb_010091_040 0.1868564512 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
14 Hb_002836_030 0.1956647648 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
15 Hb_003582_050 0.1993929573 - - hypothetical protein POPTR_0008s13950g [Populus trichocarpa]
16 Hb_000522_020 0.2056159057 - - PREDICTED: two-pore potassium channel 1 [Jatropha curcas]
17 Hb_002571_050 0.2089659851 - - PREDICTED: cation/calcium exchanger 1 [Jatropha curcas]
18 Hb_144813_010 0.2123708669 - - PREDICTED: uncharacterized protein LOC105781565 [Gossypium raimondii]
19 Hb_001821_070 0.2222521202 - - Uncharacterized protein TCM_038456 [Theobroma cacao]
20 Hb_052764_010 0.2320439773 - - hypothetical protein POPTR_0011s04320g [Populus trichocarpa]

Gene co-expression network

sample Hb_080873_010 Hb_080873_010 Hb_000892_040 Hb_000892_040 Hb_080873_010--Hb_000892_040 Hb_002092_140 Hb_002092_140 Hb_080873_010--Hb_002092_140 Hb_166828_010 Hb_166828_010 Hb_080873_010--Hb_166828_010 Hb_000002_280 Hb_000002_280 Hb_080873_010--Hb_000002_280 Hb_002284_040 Hb_002284_040 Hb_080873_010--Hb_002284_040 Hb_000501_180 Hb_000501_180 Hb_080873_010--Hb_000501_180 Hb_000892_040--Hb_000501_180 Hb_000892_040--Hb_002284_040 Hb_000892_040--Hb_002092_140 Hb_007590_040 Hb_007590_040 Hb_000892_040--Hb_007590_040 Hb_000892_040--Hb_166828_010 Hb_002092_140--Hb_166828_010 Hb_000320_170 Hb_000320_170 Hb_002092_140--Hb_000320_170 Hb_002836_030 Hb_002836_030 Hb_002092_140--Hb_002836_030 Hb_003582_050 Hb_003582_050 Hb_002092_140--Hb_003582_050 Hb_002092_140--Hb_000002_280 Hb_166828_010--Hb_000320_170 Hb_166828_010--Hb_002836_030 Hb_166828_010--Hb_003582_050 Hb_144813_010 Hb_144813_010 Hb_166828_010--Hb_144813_010 Hb_000300_240 Hb_000300_240 Hb_000002_280--Hb_000300_240 Hb_000002_280--Hb_166828_010 Hb_002571_050 Hb_002571_050 Hb_000002_280--Hb_002571_050 Hb_010091_040 Hb_010091_040 Hb_000002_280--Hb_010091_040 Hb_002284_040--Hb_010091_040 Hb_007858_030 Hb_007858_030 Hb_002284_040--Hb_007858_030 Hb_052764_010 Hb_052764_010 Hb_002284_040--Hb_052764_010 Hb_000205_220 Hb_000205_220 Hb_002284_040--Hb_000205_220 Hb_000522_020 Hb_000522_020 Hb_000501_180--Hb_000522_020 Hb_000501_180--Hb_007590_040 Hb_015473_020 Hb_015473_020 Hb_000501_180--Hb_015473_020 Hb_001821_070 Hb_001821_070 Hb_000501_180--Hb_001821_070 Hb_002221_020 Hb_002221_020 Hb_000501_180--Hb_002221_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.99343 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.45448

CAGE analysis