Hb_081207_010

Information

Type -
Description -
Location Contig81207: 2-650
Sequence    

Annotation

kegg
ID rcu:RCOM_0741070
description hypothetical protein
nr
ID KDP45588.1
description hypothetical protein JCGZ_17195 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LEB2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17195 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_081207_010 0.0 - - hypothetical protein JCGZ_17195 [Jatropha curcas]
2 Hb_000445_220 0.0914254105 - - -
3 Hb_002259_050 0.0963883729 - - unnamed protein product [Vitis vinifera]
4 Hb_006922_040 0.1139334025 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
5 Hb_002228_090 0.1193670192 - - hypothetical protein POPTR_0006s23560g [Populus trichocarpa]
6 Hb_175450_010 0.1581639376 - - -
7 Hb_002431_060 0.1653045888 - - -
8 Hb_000501_020 0.1976242303 - - PREDICTED: uncharacterized protein LOC100250168 [Vitis vinifera]
9 Hb_000184_190 0.2201894808 - - hypothetical protein VITISV_016970 [Vitis vinifera]
10 Hb_002615_100 0.2393589375 - - -
11 Hb_000373_300 0.2455084673 - - hypothetical protein F775_20382 [Aegilops tauschii]
12 Hb_006588_010 0.2574697287 - - -
13 Hb_002741_030 0.2590925755 - - -
14 Hb_002240_080 0.2682766277 - - -
15 Hb_006502_040 0.2738231821 transcription factor TF Family: bHLH Transcription factor ICE1, putative [Ricinus communis]
16 Hb_003893_080 0.2767083929 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002918_300 0.2774861746 - - -
18 Hb_032660_020 0.2780172172 - - PREDICTED: F-box protein At5g49610-like [Jatropha curcas]
19 Hb_001427_140 0.2788452217 - - PREDICTED: probable phospholipase A2 homolog 1 [Jatropha curcas]
20 Hb_001186_050 0.2867671528 - - -

Gene co-expression network

sample Hb_081207_010 Hb_081207_010 Hb_000445_220 Hb_000445_220 Hb_081207_010--Hb_000445_220 Hb_002259_050 Hb_002259_050 Hb_081207_010--Hb_002259_050 Hb_006922_040 Hb_006922_040 Hb_081207_010--Hb_006922_040 Hb_002228_090 Hb_002228_090 Hb_081207_010--Hb_002228_090 Hb_175450_010 Hb_175450_010 Hb_081207_010--Hb_175450_010 Hb_002431_060 Hb_002431_060 Hb_081207_010--Hb_002431_060 Hb_000445_220--Hb_006922_040 Hb_000501_020 Hb_000501_020 Hb_000445_220--Hb_000501_020 Hb_000445_220--Hb_002259_050 Hb_000445_220--Hb_002228_090 Hb_000445_220--Hb_002431_060 Hb_002259_050--Hb_175450_010 Hb_002259_050--Hb_006922_040 Hb_002259_050--Hb_002431_060 Hb_002259_050--Hb_002228_090 Hb_006922_040--Hb_000501_020 Hb_006922_040--Hb_002228_090 Hb_000184_190 Hb_000184_190 Hb_006922_040--Hb_000184_190 Hb_002228_090--Hb_175450_010 Hb_002228_090--Hb_000184_190 Hb_002615_100 Hb_002615_100 Hb_175450_010--Hb_002615_100 Hb_175450_010--Hb_002431_060 Hb_175450_010--Hb_000445_220 Hb_002918_300 Hb_002918_300 Hb_002431_060--Hb_002918_300 Hb_032660_020 Hb_032660_020 Hb_002431_060--Hb_032660_020 Hb_002431_060--Hb_002228_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.525345 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.32004 1.38883 0 0 0

CAGE analysis