Hb_081599_010

Information

Type -
Description -
Location Contig81599: 274-1623
Sequence    

Annotation

kegg
ID rcu:RCOM_0837770
description hypothetical protein
nr
ID XP_002522480.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID B9S911
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0837770 PE=4 SV=1
Gene Ontology
ID GO:0005794
description o-fucosyltransferase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_081599_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002740_080 0.0607590557 - - flap endonuclease-1, putative [Ricinus communis]
3 Hb_001227_120 0.0740673076 transcription factor TF Family: C2H2 Histone deacetylase 2a, putative [Ricinus communis]
4 Hb_000152_600 0.0781600857 - - PREDICTED: protein jagunal homolog 1 [Jatropha curcas]
5 Hb_003498_100 0.0794471328 - - component of oligomeric golgi complex, putative [Ricinus communis]
6 Hb_001279_190 0.082125826 - - PREDICTED: uncharacterized membrane protein At3g27390 isoform X1 [Jatropha curcas]
7 Hb_001269_130 0.0887165257 - - plant poly(A)+ RNA export protein, putative [Ricinus communis]
8 Hb_000173_130 0.0894755638 - - PREDICTED: probable E3 ubiquitin-protein ligase LUL4 isoform X1 [Jatropha curcas]
9 Hb_003777_030 0.0899441412 - - Exocyst complex component, putative [Ricinus communis]
10 Hb_000815_300 0.0905994305 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]
11 Hb_001250_050 0.092553001 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
12 Hb_002693_030 0.0929014347 - - PREDICTED: mitochondrial outer membrane protein porin of 34 kDa [Jatropha curcas]
13 Hb_002552_040 0.0937568766 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
14 Hb_000120_810 0.0941261638 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
15 Hb_008289_040 0.0951788987 - - PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Jatropha curcas]
16 Hb_003098_070 0.0953836598 - - PREDICTED: uncharacterized protein LOC105633456 [Jatropha curcas]
17 Hb_000703_330 0.096492942 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000705_230 0.0975807376 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 2 [Jatropha curcas]
19 Hb_000072_300 0.0975989727 - - PREDICTED: probable galacturonosyltransferase 9 [Jatropha curcas]
20 Hb_000926_200 0.0976237813 transcription factor TF Family: Rcd1-like PREDICTED: cell differentiation protein RCD1 homolog isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_081599_010 Hb_081599_010 Hb_002740_080 Hb_002740_080 Hb_081599_010--Hb_002740_080 Hb_001227_120 Hb_001227_120 Hb_081599_010--Hb_001227_120 Hb_000152_600 Hb_000152_600 Hb_081599_010--Hb_000152_600 Hb_003498_100 Hb_003498_100 Hb_081599_010--Hb_003498_100 Hb_001279_190 Hb_001279_190 Hb_081599_010--Hb_001279_190 Hb_001269_130 Hb_001269_130 Hb_081599_010--Hb_001269_130 Hb_002740_080--Hb_001279_190 Hb_000160_070 Hb_000160_070 Hb_002740_080--Hb_000160_070 Hb_000072_300 Hb_000072_300 Hb_002740_080--Hb_000072_300 Hb_000815_300 Hb_000815_300 Hb_002740_080--Hb_000815_300 Hb_002740_080--Hb_001227_120 Hb_159809_070 Hb_159809_070 Hb_001227_120--Hb_159809_070 Hb_001227_120--Hb_001279_190 Hb_000019_190 Hb_000019_190 Hb_001227_120--Hb_000019_190 Hb_023313_040 Hb_023313_040 Hb_001227_120--Hb_023313_040 Hb_000702_090 Hb_000702_090 Hb_001227_120--Hb_000702_090 Hb_005993_010 Hb_005993_010 Hb_000152_600--Hb_005993_010 Hb_000152_600--Hb_000072_300 Hb_019181_030 Hb_019181_030 Hb_000152_600--Hb_019181_030 Hb_000130_270 Hb_000130_270 Hb_000152_600--Hb_000130_270 Hb_000069_640 Hb_000069_640 Hb_000152_600--Hb_000069_640 Hb_000120_890 Hb_000120_890 Hb_003498_100--Hb_000120_890 Hb_178968_060 Hb_178968_060 Hb_003498_100--Hb_178968_060 Hb_089839_010 Hb_089839_010 Hb_003498_100--Hb_089839_010 Hb_003498_100--Hb_001279_190 Hb_000703_190 Hb_000703_190 Hb_003498_100--Hb_000703_190 Hb_001799_160 Hb_001799_160 Hb_003498_100--Hb_001799_160 Hb_007483_070 Hb_007483_070 Hb_001279_190--Hb_007483_070 Hb_002687_180 Hb_002687_180 Hb_001279_190--Hb_002687_180 Hb_004228_120 Hb_004228_120 Hb_001279_190--Hb_004228_120 Hb_011716_010 Hb_011716_010 Hb_001279_190--Hb_011716_010 Hb_001250_050 Hb_001250_050 Hb_001279_190--Hb_001250_050 Hb_000663_060 Hb_000663_060 Hb_001269_130--Hb_000663_060 Hb_000080_130 Hb_000080_130 Hb_001269_130--Hb_000080_130 Hb_000364_050 Hb_000364_050 Hb_001269_130--Hb_000364_050 Hb_003098_070 Hb_003098_070 Hb_001269_130--Hb_003098_070 Hb_006824_010 Hb_006824_010 Hb_001269_130--Hb_006824_010 Hb_005946_150 Hb_005946_150 Hb_001269_130--Hb_005946_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.23249 2.36001 4.67347 5.3614 1.28824 2.03541
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.43587 2.91453 1.77628 2.91358 3.03283

CAGE analysis