Hb_081745_010

Information

Type -
Description -
Location Contig81745: 229-600
Sequence    

Annotation

kegg
ID pop:POPTR_2151s00200g
description hypothetical protein
nr
ID KDO41020.1
description hypothetical protein CISIN_1g030953mg [Citrus sinensis]
swissprot
ID -
description -
trembl
ID A0A067DHJ3
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030953mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_081745_010 0.0 - - hypothetical protein CISIN_1g030953mg [Citrus sinensis]
2 Hb_010727_010 0.1459531689 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
3 Hb_001183_010 0.1498353679 - - -
4 Hb_141918_010 0.1899299011 - - S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]
5 Hb_002234_190 0.192809463 - - PREDICTED: putative non-specific lipid-transfer protein 14 [Jatropha curcas]
6 Hb_073395_010 0.2041985659 - - -
7 Hb_164945_040 0.2043260503 - - PREDICTED: uncharacterized protein LOC105628261 [Jatropha curcas]
8 Hb_000025_340 0.2100245467 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Jatropha curcas]
9 Hb_000836_120 0.2115627513 - - syntaxin, putative [Ricinus communis]
10 Hb_001268_390 0.2147685606 - - PREDICTED: uncharacterized protein LOC105108367 isoform X1 [Populus euphratica]
11 Hb_077054_010 0.215288863 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
12 Hb_005375_040 0.2192870312 - - dicer-1, putative [Ricinus communis]
13 Hb_145979_010 0.2249263142 - - PREDICTED: uncharacterized protein LOC105172316 [Sesamum indicum]
14 Hb_000016_100 0.2249778946 transcription factor TF Family: TCP PREDICTED: transcription factor TCP19 [Jatropha curcas]
15 Hb_006588_150 0.2276473313 - - PREDICTED: steroid 5-alpha-reductase DET2 [Jatropha curcas]
16 Hb_049160_010 0.2284999428 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
17 Hb_002876_290 0.2285652216 - - PREDICTED: uncharacterized protein LOC104446353 [Eucalyptus grandis]
18 Hb_063480_020 0.230077228 - - unnamed protein product [Vitis vinifera]
19 Hb_037767_010 0.2310731176 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
20 Hb_129204_060 0.2313842508 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha curcas]

Gene co-expression network

sample Hb_081745_010 Hb_081745_010 Hb_010727_010 Hb_010727_010 Hb_081745_010--Hb_010727_010 Hb_001183_010 Hb_001183_010 Hb_081745_010--Hb_001183_010 Hb_141918_010 Hb_141918_010 Hb_081745_010--Hb_141918_010 Hb_002234_190 Hb_002234_190 Hb_081745_010--Hb_002234_190 Hb_073395_010 Hb_073395_010 Hb_081745_010--Hb_073395_010 Hb_164945_040 Hb_164945_040 Hb_081745_010--Hb_164945_040 Hb_010727_010--Hb_001183_010 Hb_000025_340 Hb_000025_340 Hb_010727_010--Hb_000025_340 Hb_010727_010--Hb_141918_010 Hb_000087_050 Hb_000087_050 Hb_010727_010--Hb_000087_050 Hb_002272_080 Hb_002272_080 Hb_010727_010--Hb_002272_080 Hb_088753_010 Hb_088753_010 Hb_001183_010--Hb_088753_010 Hb_000402_210 Hb_000402_210 Hb_001183_010--Hb_000402_210 Hb_000451_070 Hb_000451_070 Hb_001183_010--Hb_000451_070 Hb_000016_100 Hb_000016_100 Hb_001183_010--Hb_000016_100 Hb_010487_020 Hb_010487_020 Hb_141918_010--Hb_010487_020 Hb_003060_090 Hb_003060_090 Hb_141918_010--Hb_003060_090 Hb_000905_170 Hb_000905_170 Hb_141918_010--Hb_000905_170 Hb_001123_290 Hb_001123_290 Hb_141918_010--Hb_001123_290 Hb_000227_060 Hb_000227_060 Hb_141918_010--Hb_000227_060 Hb_002234_190--Hb_073395_010 Hb_037767_010 Hb_037767_010 Hb_002234_190--Hb_037767_010 Hb_006502_050 Hb_006502_050 Hb_002234_190--Hb_006502_050 Hb_002876_290 Hb_002876_290 Hb_002234_190--Hb_002876_290 Hb_001902_190 Hb_001902_190 Hb_002234_190--Hb_001902_190 Hb_073395_010--Hb_000025_340 Hb_073395_010--Hb_002876_290 Hb_073395_010--Hb_001902_190 Hb_145629_010 Hb_145629_010 Hb_073395_010--Hb_145629_010 Hb_005143_040 Hb_005143_040 Hb_073395_010--Hb_005143_040 Hb_001096_100 Hb_001096_100 Hb_164945_040--Hb_001096_100 Hb_003376_310 Hb_003376_310 Hb_164945_040--Hb_003376_310 Hb_002301_380 Hb_002301_380 Hb_164945_040--Hb_002301_380 Hb_000836_120 Hb_000836_120 Hb_164945_040--Hb_000836_120 Hb_001638_040 Hb_001638_040 Hb_164945_040--Hb_001638_040 Hb_000853_030 Hb_000853_030 Hb_164945_040--Hb_000853_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.85555 17.0737 0.479355 1.95657 0.789946 9.72926
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.1271 5.47336 1.98164 5.10086 1.08226

CAGE analysis