Hb_082182_010

Information

Type -
Description -
Location Contig82182: 2321-2945
Sequence    

Annotation

kegg
ID rcu:RCOM_0740720
description leucine-rich repeat-containing protein, putative
nr
ID XP_012080079.1
description PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LAU1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17198 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_082182_010 0.0 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
2 Hb_005439_040 0.1580935658 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
3 Hb_007747_180 0.1662636179 transcription factor TF Family: TCP PREDICTED: bifunctional nitrilase/nitrile hydratase NIT4B-like [Jatropha curcas]
4 Hb_002486_010 0.1983485192 - - PREDICTED: sister chromatid cohesion 1 protein 1 [Jatropha curcas]
5 Hb_043485_010 0.2033163731 desease resistance Gene Name: NB-ARC PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like isoform X2 [Jatropha curcas]
6 Hb_015690_020 0.2105169896 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
7 Hb_024468_020 0.2127776711 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
8 Hb_001565_110 0.2154534984 - - PREDICTED: putative ABC transporter B family member 8 [Jatropha curcas]
9 Hb_001114_050 0.2194748725 - - hypothetical protein RCOM_0744580 [Ricinus communis]
10 Hb_013766_010 0.2231221021 - - hypothetical protein JCGZ_00483 [Jatropha curcas]
11 Hb_000116_430 0.2283537525 - - PREDICTED: mitochondrial phosphate carrier protein 1, mitochondrial-like isoform X1 [Jatropha curcas]
12 Hb_005224_010 0.2354831257 - - glycine-rich protein [Bruguiera gymnorhiza]
13 Hb_000367_190 0.2355733779 - - hypothetical protein RCOM_1470550 [Ricinus communis]
14 Hb_002291_010 0.2365134467 - - ring finger protein, putative [Ricinus communis]
15 Hb_002835_100 0.2384624981 - - PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 6-like [Jatropha curcas]
16 Hb_108329_020 0.2386527378 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
17 Hb_000016_190 0.2388621412 - - ABC transporter B family member 28 [Glycine soja]
18 Hb_007747_140 0.2400291346 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]
19 Hb_001911_060 0.2447363102 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
20 Hb_000990_060 0.2450820425 - - PREDICTED: protein EMBRYONIC FLOWER 1 [Jatropha curcas]

Gene co-expression network

sample Hb_082182_010 Hb_082182_010 Hb_005439_040 Hb_005439_040 Hb_082182_010--Hb_005439_040 Hb_007747_180 Hb_007747_180 Hb_082182_010--Hb_007747_180 Hb_002486_010 Hb_002486_010 Hb_082182_010--Hb_002486_010 Hb_043485_010 Hb_043485_010 Hb_082182_010--Hb_043485_010 Hb_015690_020 Hb_015690_020 Hb_082182_010--Hb_015690_020 Hb_024468_020 Hb_024468_020 Hb_082182_010--Hb_024468_020 Hb_001565_110 Hb_001565_110 Hb_005439_040--Hb_001565_110 Hb_005439_040--Hb_002486_010 Hb_005439_040--Hb_043485_010 Hb_000500_140 Hb_000500_140 Hb_005439_040--Hb_000500_140 Hb_007747_140 Hb_007747_140 Hb_005439_040--Hb_007747_140 Hb_007747_180--Hb_002486_010 Hb_002291_010 Hb_002291_010 Hb_007747_180--Hb_002291_010 Hb_013766_010 Hb_013766_010 Hb_007747_180--Hb_013766_010 Hb_002805_020 Hb_002805_020 Hb_007747_180--Hb_002805_020 Hb_000297_020 Hb_000297_020 Hb_007747_180--Hb_000297_020 Hb_002486_010--Hb_002805_020 Hb_002486_010--Hb_013766_010 Hb_002486_010--Hb_007747_140 Hb_000011_420 Hb_000011_420 Hb_002486_010--Hb_000011_420 Hb_108329_020 Hb_108329_020 Hb_043485_010--Hb_108329_020 Hb_083820_010 Hb_083820_010 Hb_043485_010--Hb_083820_010 Hb_001486_030 Hb_001486_030 Hb_043485_010--Hb_001486_030 Hb_015690_010 Hb_015690_010 Hb_043485_010--Hb_015690_010 Hb_001246_030 Hb_001246_030 Hb_043485_010--Hb_001246_030 Hb_008147_070 Hb_008147_070 Hb_043485_010--Hb_008147_070 Hb_000419_060 Hb_000419_060 Hb_015690_020--Hb_000419_060 Hb_001969_090 Hb_001969_090 Hb_015690_020--Hb_001969_090 Hb_003442_070 Hb_003442_070 Hb_015690_020--Hb_003442_070 Hb_002835_180 Hb_002835_180 Hb_015690_020--Hb_002835_180 Hb_000260_290 Hb_000260_290 Hb_015690_020--Hb_000260_290 Hb_003052_220 Hb_003052_220 Hb_015690_020--Hb_003052_220 Hb_003777_050 Hb_003777_050 Hb_024468_020--Hb_003777_050 Hb_005224_010 Hb_005224_010 Hb_024468_020--Hb_005224_010 Hb_000016_190 Hb_000016_190 Hb_024468_020--Hb_000016_190 Hb_003972_080 Hb_003972_080 Hb_024468_020--Hb_003972_080 Hb_003609_020 Hb_003609_020 Hb_024468_020--Hb_003609_020 Hb_000110_320 Hb_000110_320 Hb_024468_020--Hb_000110_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.607018 1.92076 0.095458 0.0823084 0.123785 0.623666
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.71145 2.61559 5.12719 4.24999 1.30986

CAGE analysis