Hb_082402_020

Information

Type -
Description -
Location Contig82402: 9408-12086
Sequence    

Annotation

kegg
ID rcu:RCOM_0322400
description hypothetical protein
nr
ID XP_012074319.1
description PREDICTED: aluminum-activated malate transporter 8-like [Jatropha curcas]
swissprot
ID Q9SRM9
description Aluminum-activated malate transporter 8 OS=Arabidopsis thaliana GN=ALMT8 PE=3 SV=1
trembl
ID A0A067KW92
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08758 PE=4 SV=1
Gene Ontology
ID GO:0015743
description aluminum-activated malate transporter 8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_082402_020 0.0 - - PREDICTED: aluminum-activated malate transporter 8-like [Jatropha curcas]
2 Hb_002890_170 0.0130392457 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 4-like [Populus euphratica]
3 Hb_001862_040 0.0403006926 - - heat shock protein 70 (HSP70)-interacting protein, putative [Ricinus communis]
4 Hb_002400_200 0.0460068162 - - 14 kDa proline-rich protein DC2.15 precursor, putative [Ricinus communis]
5 Hb_003747_090 0.0465970081 - - PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic isoform X2 [Jatropha curcas]
6 Hb_005375_090 0.048827541 - - PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Jatropha curcas]
7 Hb_000334_290 0.0574136544 - - monovalent cation:proton antiporter, putative [Ricinus communis]
8 Hb_004129_170 0.060275341 - - PREDICTED: protein trichome birefringence-like 43 [Jatropha curcas]
9 Hb_000948_240 0.0606234018 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002014_140 0.0606314136 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
11 Hb_002374_480 0.0634709252 - - Photosystem II 22 kDa protein, chloroplast precursor, putative [Ricinus communis]
12 Hb_153106_010 0.0641207065 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
13 Hb_013405_110 0.0641757739 - - multidrug resistance pump, putative [Ricinus communis]
14 Hb_001936_100 0.0656537018 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002785_040 0.0660261356 - - sedoheptulose-1,7-bisphosphatase, chloroplast, putative [Ricinus communis]
16 Hb_002592_040 0.0705822278 - - ACC oxidase 3 [Hevea brasiliensis]
17 Hb_006901_010 0.0718760415 - - hypothetical protein JCGZ_20722 [Jatropha curcas]
18 Hb_003032_080 0.0718857578 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004048_080 0.0740221186 - - hypothetical protein POPTR_0001s40360g [Populus trichocarpa]
20 Hb_000703_340 0.0752792158 - - Oxygen-evolving enhancer protein 2, chloroplast precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_082402_020 Hb_082402_020 Hb_002890_170 Hb_002890_170 Hb_082402_020--Hb_002890_170 Hb_001862_040 Hb_001862_040 Hb_082402_020--Hb_001862_040 Hb_002400_200 Hb_002400_200 Hb_082402_020--Hb_002400_200 Hb_003747_090 Hb_003747_090 Hb_082402_020--Hb_003747_090 Hb_005375_090 Hb_005375_090 Hb_082402_020--Hb_005375_090 Hb_000334_290 Hb_000334_290 Hb_082402_020--Hb_000334_290 Hb_002890_170--Hb_002400_200 Hb_002890_170--Hb_003747_090 Hb_002890_170--Hb_005375_090 Hb_004129_170 Hb_004129_170 Hb_002890_170--Hb_004129_170 Hb_153106_010 Hb_153106_010 Hb_002890_170--Hb_153106_010 Hb_003032_080 Hb_003032_080 Hb_001862_040--Hb_003032_080 Hb_000948_240 Hb_000948_240 Hb_001862_040--Hb_000948_240 Hb_001862_040--Hb_002890_170 Hb_002014_150 Hb_002014_150 Hb_001862_040--Hb_002014_150 Hb_003050_380 Hb_003050_380 Hb_001862_040--Hb_003050_380 Hb_001936_100 Hb_001936_100 Hb_002400_200--Hb_001936_100 Hb_001053_070 Hb_001053_070 Hb_002400_200--Hb_001053_070 Hb_002374_480 Hb_002374_480 Hb_002400_200--Hb_002374_480 Hb_000373_210 Hb_000373_210 Hb_002400_200--Hb_000373_210 Hb_001049_130 Hb_001049_130 Hb_002400_200--Hb_001049_130 Hb_003747_090--Hb_005375_090 Hb_002785_040 Hb_002785_040 Hb_003747_090--Hb_002785_040 Hb_013405_110 Hb_013405_110 Hb_003747_090--Hb_013405_110 Hb_003747_090--Hb_004129_170 Hb_005375_090--Hb_002785_040 Hb_005375_090--Hb_013405_110 Hb_005375_090--Hb_004129_170 Hb_000985_150 Hb_000985_150 Hb_000334_290--Hb_000985_150 Hb_002014_140 Hb_002014_140 Hb_000334_290--Hb_002014_140 Hb_006901_010 Hb_006901_010 Hb_000334_290--Hb_006901_010 Hb_002893_200 Hb_002893_200 Hb_000334_290--Hb_002893_200 Hb_004525_010 Hb_004525_010 Hb_000334_290--Hb_004525_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.159174 0.0439499 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.31046

CAGE analysis