Hb_082550_010

Information

Type -
Description -
Location Contig82550: 2779-3394
Sequence    

Annotation

kegg
ID pop:POPTR_0017s09260g
description hypothetical protein
nr
ID KDO75599.1
description hypothetical protein CISIN_1g0081081mg, partial [Citrus sinensis]
swissprot
ID Q9SYS7
description Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=3 SV=1
trembl
ID A0A067G7N7
description Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0081081mg PE=3 SV=1
Gene Ontology
ID GO:0004672
description cysteine-rich receptor-like protein kinase 10

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_082550_010 0.0 - - hypothetical protein CISIN_1g0081081mg, partial [Citrus sinensis]
2 Hb_000836_030 0.1112975957 - - ubiquitin-conjugating enzyme h, putative [Ricinus communis]
3 Hb_006198_040 0.1161607296 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000130_480 0.1190648202 - - PREDICTED: histone-lysine N-methyltransferase SETD1B [Jatropha curcas]
5 Hb_000665_210 0.1216077302 - - PREDICTED: synaptotagmin-4 [Jatropha curcas]
6 Hb_124579_020 0.1222186634 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Jatropha curcas]
7 Hb_000076_060 0.1232143554 - - hypothetical protein RCOM_0586940 [Ricinus communis]
8 Hb_010264_010 0.1245582995 - - PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Jatropha curcas]
9 Hb_001278_090 0.1263824196 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
10 Hb_003142_080 0.1264625722 - - receptor serine/threonine kinase, putative [Ricinus communis]
11 Hb_000784_060 0.1296022285 - - conserved hypothetical protein [Ricinus communis]
12 Hb_029223_010 0.1300265934 - - PREDICTED: ACT domain-containing protein ACR10 [Jatropha curcas]
13 Hb_001369_390 0.1303300277 - - Glycerol-3-phosphate transporter, putative [Ricinus communis]
14 Hb_185474_020 0.1325582936 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
15 Hb_000265_030 0.1353586444 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
16 Hb_000380_140 0.1375489892 - - PREDICTED: uncharacterized protein LOC105628069 [Jatropha curcas]
17 Hb_000164_110 0.1378671128 transcription factor TF Family: C2H2 hypothetical protein POPTR_0001s44130g [Populus trichocarpa]
18 Hb_002635_010 0.1384430955 - - homogentisate phytyl transferase [Hevea brasiliensis]
19 Hb_003058_170 0.1384813823 - - PREDICTED: F-box protein At2g26850 isoform X1 [Jatropha curcas]
20 Hb_032143_010 0.1398173378 - - cinnamoyl-CoA reductase, putative [Ricinus communis]

Gene co-expression network

sample Hb_082550_010 Hb_082550_010 Hb_000836_030 Hb_000836_030 Hb_082550_010--Hb_000836_030 Hb_006198_040 Hb_006198_040 Hb_082550_010--Hb_006198_040 Hb_000130_480 Hb_000130_480 Hb_082550_010--Hb_000130_480 Hb_000665_210 Hb_000665_210 Hb_082550_010--Hb_000665_210 Hb_124579_020 Hb_124579_020 Hb_082550_010--Hb_124579_020 Hb_000076_060 Hb_000076_060 Hb_082550_010--Hb_000076_060 Hb_004607_160 Hb_004607_160 Hb_000836_030--Hb_004607_160 Hb_000784_060 Hb_000784_060 Hb_000836_030--Hb_000784_060 Hb_000836_030--Hb_006198_040 Hb_000836_030--Hb_000130_480 Hb_002095_020 Hb_002095_020 Hb_000836_030--Hb_002095_020 Hb_001369_390 Hb_001369_390 Hb_000836_030--Hb_001369_390 Hb_003142_080 Hb_003142_080 Hb_006198_040--Hb_003142_080 Hb_006198_040--Hb_000130_480 Hb_185474_020 Hb_185474_020 Hb_006198_040--Hb_185474_020 Hb_000033_010 Hb_000033_010 Hb_006198_040--Hb_000033_010 Hb_006198_040--Hb_124579_020 Hb_002635_010 Hb_002635_010 Hb_000130_480--Hb_002635_010 Hb_000130_480--Hb_004607_160 Hb_000130_480--Hb_124579_020 Hb_000130_480--Hb_003142_080 Hb_009421_070 Hb_009421_070 Hb_000665_210--Hb_009421_070 Hb_000665_210--Hb_000784_060 Hb_001098_040 Hb_001098_040 Hb_000665_210--Hb_001098_040 Hb_000665_210--Hb_000076_060 Hb_000424_140 Hb_000424_140 Hb_000665_210--Hb_000424_140 Hb_000977_020 Hb_000977_020 Hb_000665_210--Hb_000977_020 Hb_010311_020 Hb_010311_020 Hb_124579_020--Hb_010311_020 Hb_000416_010 Hb_000416_010 Hb_124579_020--Hb_000416_010 Hb_124579_020--Hb_185474_020 Hb_124579_020--Hb_003142_080 Hb_124579_020--Hb_002635_010 Hb_003058_170 Hb_003058_170 Hb_000076_060--Hb_003058_170 Hb_005569_010 Hb_005569_010 Hb_000076_060--Hb_005569_010 Hb_000076_060--Hb_001098_040 Hb_000076_060--Hb_000977_020 Hb_000076_060--Hb_009421_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.690434 2.29268 3.60245 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.158655 0.124621 0 1.83278 6.14028

CAGE analysis