Hb_082870_010

Information

Type -
Description -
Location Contig82870: 467-1943
Sequence    

Annotation

kegg
ID rcu:RCOM_1331600
description Disease resistance protein RFL1, putative (EC:3.1.3.16)
nr
ID XP_002521789.1
description Disease resistance protein RFL1, putative [Ricinus communis]
swissprot
ID Q42484
description Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2 PE=1 SV=1
trembl
ID B9S720
description Disease resistance protein RFL1, putative OS=Ricinus communis GN=RCOM_1331600 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_082870_010 0.0 - - Disease resistance protein RFL1, putative [Ricinus communis]
2 Hb_003602_090 0.0922703688 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9-like [Jatropha curcas]
3 Hb_009510_050 0.0986323073 - - conserved hypothetical protein [Ricinus communis]
4 Hb_006615_180 0.110012802 - - hypothetical protein B456_003G103400 [Gossypium raimondii]
5 Hb_017604_020 0.1165650523 - - hypothetical protein JCGZ_22673 [Jatropha curcas]
6 Hb_117127_010 0.1176926757 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH106 [Jatropha curcas]
7 Hb_000098_250 0.1201033385 - - UDP-glucose flavonoid 3-O-glucosyltransferase [Medicago truncatula]
8 Hb_019040_010 0.1239192923 - - PREDICTED: indole-3-acetic acid-induced protein ARG7 [Jatropha curcas]
9 Hb_003556_070 0.1300228461 - - metal ion binding protein, putative [Ricinus communis]
10 Hb_000000_070 0.1349910744 - - allene oxide synthase [Hevea brasiliensis]
11 Hb_000771_030 0.1372303038 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
12 Hb_000723_060 0.1374355384 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
13 Hb_001699_050 0.1388479553 transcription factor TF Family: MYB hypothetical protein POPTR_0005s11410g [Populus trichocarpa]
14 Hb_017857_010 0.1404900449 - - -
15 Hb_000976_340 0.1414363006 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_073119_010 0.1418803553 - - hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
17 Hb_168068_010 0.1419144962 - - Disease resistance protein RFL1, putative [Ricinus communis]
18 Hb_002529_080 0.1425598275 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase [Jatropha curcas]
19 Hb_041145_010 0.1434549654 - - hypothetical protein CISIN_1g021653mg [Citrus sinensis]
20 Hb_000391_060 0.1479124395 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]

Gene co-expression network

sample Hb_082870_010 Hb_082870_010 Hb_003602_090 Hb_003602_090 Hb_082870_010--Hb_003602_090 Hb_009510_050 Hb_009510_050 Hb_082870_010--Hb_009510_050 Hb_006615_180 Hb_006615_180 Hb_082870_010--Hb_006615_180 Hb_017604_020 Hb_017604_020 Hb_082870_010--Hb_017604_020 Hb_117127_010 Hb_117127_010 Hb_082870_010--Hb_117127_010 Hb_000098_250 Hb_000098_250 Hb_082870_010--Hb_000098_250 Hb_003602_090--Hb_009510_050 Hb_003602_090--Hb_006615_180 Hb_000723_060 Hb_000723_060 Hb_003602_090--Hb_000723_060 Hb_003602_090--Hb_117127_010 Hb_019040_010 Hb_019040_010 Hb_003602_090--Hb_019040_010 Hb_009510_050--Hb_006615_180 Hb_009510_050--Hb_117127_010 Hb_009510_050--Hb_000723_060 Hb_009510_050--Hb_017604_020 Hb_006615_180--Hb_000723_060 Hb_000000_070 Hb_000000_070 Hb_006615_180--Hb_000000_070 Hb_000101_140 Hb_000101_140 Hb_006615_180--Hb_000101_140 Hb_006615_180--Hb_117127_010 Hb_001699_050 Hb_001699_050 Hb_017604_020--Hb_001699_050 Hb_002276_100 Hb_002276_100 Hb_017604_020--Hb_002276_100 Hb_000808_160 Hb_000808_160 Hb_017604_020--Hb_000808_160 Hb_003556_070 Hb_003556_070 Hb_017604_020--Hb_003556_070 Hb_004544_090 Hb_004544_090 Hb_017604_020--Hb_004544_090 Hb_117127_010--Hb_000098_250 Hb_008667_030 Hb_008667_030 Hb_117127_010--Hb_008667_030 Hb_002410_010 Hb_002410_010 Hb_117127_010--Hb_002410_010 Hb_002529_080 Hb_002529_080 Hb_117127_010--Hb_002529_080 Hb_117127_010--Hb_000000_070 Hb_000098_250--Hb_002410_010 Hb_000098_250--Hb_008667_030 Hb_000098_250--Hb_002529_080 Hb_020648_020 Hb_020648_020 Hb_000098_250--Hb_020648_020 Hb_000771_030 Hb_000771_030 Hb_000098_250--Hb_000771_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.299961 20.1593 6.31557 9.34722 0.346784 0.29964
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.53288 6.15627 1.85168

CAGE analysis