Hb_082972_010

Information

Type -
Description -
Location Contig82972: 168-2864
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_082972_010 0.0 - - -
2 Hb_001817_110 0.0302547192 - - hypothetical protein JCGZ_15340 [Jatropha curcas]
3 Hb_002060_070 0.0594243703 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
4 Hb_002837_080 0.0700429657 - - acyltransferase, putative [Ricinus communis]
5 Hb_043127_010 0.0733012318 - - PREDICTED: uncharacterized protein LOC105648822 [Jatropha curcas]
6 Hb_012691_060 0.1363232691 - - PREDICTED: isoflavone 2'-hydroxylase-like isoform X1 [Prunus mume]
7 Hb_001379_080 0.14138649 - - PREDICTED: WAT1-related protein At5g07050-like [Vitis vinifera]
8 Hb_013407_010 0.1462080592 - - hypothetical protein JCGZ_23575 [Jatropha curcas]
9 Hb_000096_050 0.1527381954 - - conserved hypothetical protein [Ricinus communis]
10 Hb_009492_020 0.1652525317 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
11 Hb_000930_020 0.1711373923 - - hypothetical protein PRUPE_ppa026493mg [Prunus persica]
12 Hb_005018_030 0.1712555059 - - hypothetical protein CICLE_v10019811mg [Citrus clementina]
13 Hb_000020_180 0.1716747175 - - laccase, putative [Ricinus communis]
14 Hb_000752_040 0.1764576919 - - PREDICTED: uncharacterized protein LOC104884990 [Beta vulgaris subsp. vulgaris]
15 Hb_156850_050 0.1771126574 - - PREDICTED: uncharacterized protein LOC105635250 [Jatropha curcas]
16 Hb_001709_080 0.1842493363 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
17 Hb_002471_280 0.1876692011 - - PREDICTED: cyclin-SDS [Jatropha curcas]
18 Hb_019925_020 0.1886385313 - - electron carrier, putative [Ricinus communis]
19 Hb_000805_220 0.1925317861 - - polyprotein [Citrus endogenous pararetrovirus]
20 Hb_005827_020 0.1936673059 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Populus euphratica]

Gene co-expression network

sample Hb_082972_010 Hb_082972_010 Hb_001817_110 Hb_001817_110 Hb_082972_010--Hb_001817_110 Hb_002060_070 Hb_002060_070 Hb_082972_010--Hb_002060_070 Hb_002837_080 Hb_002837_080 Hb_082972_010--Hb_002837_080 Hb_043127_010 Hb_043127_010 Hb_082972_010--Hb_043127_010 Hb_012691_060 Hb_012691_060 Hb_082972_010--Hb_012691_060 Hb_001379_080 Hb_001379_080 Hb_082972_010--Hb_001379_080 Hb_001817_110--Hb_043127_010 Hb_001817_110--Hb_002837_080 Hb_001817_110--Hb_002060_070 Hb_013407_010 Hb_013407_010 Hb_001817_110--Hb_013407_010 Hb_001817_110--Hb_012691_060 Hb_002060_070--Hb_002837_080 Hb_002060_070--Hb_001379_080 Hb_000096_050 Hb_000096_050 Hb_002060_070--Hb_000096_050 Hb_000930_020 Hb_000930_020 Hb_002060_070--Hb_000930_020 Hb_002837_080--Hb_043127_010 Hb_002837_080--Hb_013407_010 Hb_009492_020 Hb_009492_020 Hb_002837_080--Hb_009492_020 Hb_043127_010--Hb_013407_010 Hb_043127_010--Hb_002060_070 Hb_043127_010--Hb_012691_060 Hb_005018_030 Hb_005018_030 Hb_012691_060--Hb_005018_030 Hb_005183_030 Hb_005183_030 Hb_012691_060--Hb_005183_030 Hb_019925_020 Hb_019925_020 Hb_012691_060--Hb_019925_020 Hb_037519_010 Hb_037519_010 Hb_012691_060--Hb_037519_010 Hb_000805_220 Hb_000805_220 Hb_001379_080--Hb_000805_220 Hb_001379_080--Hb_002837_080 Hb_001379_080--Hb_000930_020 Hb_100526_020 Hb_100526_020 Hb_001379_080--Hb_100526_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0380736 0 0.0742072 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0839995

CAGE analysis