Hb_084230_010

Information

Type -
Description -
Location Contig84230: 1353-3491
Sequence    

Annotation

kegg
ID cic:CICLE_v10007835mg
description hypothetical protein
nr
ID XP_012084929.1
description PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]
swissprot
ID Q6K7R2
description Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japonica GN=IRL6 PE=2 SV=1
trembl
ID A0A067GF92
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007962mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_084230_010 0.0 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]
2 Hb_004221_030 0.1181081113 transcription factor TF Family: bHLH PREDICTED: transcription factor SPATULA-like isoform X1 [Jatropha curcas]
3 Hb_000984_220 0.1574178902 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Populus euphratica]
4 Hb_000500_350 0.1662937221 - - PREDICTED: uncharacterized protein LOC105649734 [Jatropha curcas]
5 Hb_000800_020 0.1687976741 - - PREDICTED: 3-phosphoinositide-dependent protein kinase 2 [Jatropha curcas]
6 Hb_000905_120 0.1729726096 - - PREDICTED: uncharacterized protein LOC105628677 [Jatropha curcas]
7 Hb_011381_040 0.174131135 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic [Jatropha curcas]
8 Hb_000684_120 0.1750842939 - - PREDICTED: uncharacterized protein LOC105642190 isoform X2 [Jatropha curcas]
9 Hb_000364_170 0.1753115366 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase CLF [Jatropha curcas]
10 Hb_001301_330 0.1767426431 - - OTU-like cysteine protease family protein [Populus trichocarpa]
11 Hb_030545_010 0.1773630256 - - PREDICTED: uncharacterized protein LOC105648741 [Jatropha curcas]
12 Hb_160256_010 0.178951136 - - -
13 Hb_010998_050 0.1816622461 - - PREDICTED: kinesin-like protein KIF22 isoform X2 [Jatropha curcas]
14 Hb_114310_120 0.1835849487 - - PREDICTED: 50S ribosomal protein L31, chloroplastic [Eucalyptus grandis]
15 Hb_007304_030 0.1836858932 - - PREDICTED: uncharacterized protein LOC105635926 isoform X2 [Jatropha curcas]
16 Hb_000120_350 0.184130069 - - PREDICTED: uncharacterized protein LOC104422872 isoform X1 [Eucalyptus grandis]
17 Hb_000392_450 0.1841587794 - - PREDICTED: isochorismate synthase 2, chloroplastic [Jatropha curcas]
18 Hb_002027_320 0.1842468704 - - PREDICTED: RNA-binding protein BRN1 [Jatropha curcas]
19 Hb_010488_040 0.1857676652 - - PREDICTED: phosphomannomutase [Populus euphratica]
20 Hb_000538_130 0.1861388058 - - phytoene synthase 2 [Manihot esculenta]

Gene co-expression network

sample Hb_084230_010 Hb_084230_010 Hb_004221_030 Hb_004221_030 Hb_084230_010--Hb_004221_030 Hb_000984_220 Hb_000984_220 Hb_084230_010--Hb_000984_220 Hb_000500_350 Hb_000500_350 Hb_084230_010--Hb_000500_350 Hb_000800_020 Hb_000800_020 Hb_084230_010--Hb_000800_020 Hb_000905_120 Hb_000905_120 Hb_084230_010--Hb_000905_120 Hb_011381_040 Hb_011381_040 Hb_084230_010--Hb_011381_040 Hb_002027_320 Hb_002027_320 Hb_004221_030--Hb_002027_320 Hb_002783_220 Hb_002783_220 Hb_004221_030--Hb_002783_220 Hb_160256_010 Hb_160256_010 Hb_004221_030--Hb_160256_010 Hb_030545_010 Hb_030545_010 Hb_004221_030--Hb_030545_010 Hb_003874_010 Hb_003874_010 Hb_004221_030--Hb_003874_010 Hb_005511_130 Hb_005511_130 Hb_000984_220--Hb_005511_130 Hb_004730_020 Hb_004730_020 Hb_000984_220--Hb_004730_020 Hb_000984_220--Hb_000800_020 Hb_001160_110 Hb_001160_110 Hb_000984_220--Hb_001160_110 Hb_003687_080 Hb_003687_080 Hb_000984_220--Hb_003687_080 Hb_004158_050 Hb_004158_050 Hb_000984_220--Hb_004158_050 Hb_005914_050 Hb_005914_050 Hb_000500_350--Hb_005914_050 Hb_000438_130 Hb_000438_130 Hb_000500_350--Hb_000438_130 Hb_001386_090 Hb_001386_090 Hb_000500_350--Hb_001386_090 Hb_000500_350--Hb_004221_030 Hb_012545_040 Hb_012545_040 Hb_000500_350--Hb_012545_040 Hb_006588_190 Hb_006588_190 Hb_000800_020--Hb_006588_190 Hb_013405_070 Hb_013405_070 Hb_000800_020--Hb_013405_070 Hb_011671_340 Hb_011671_340 Hb_000800_020--Hb_011671_340 Hb_000800_020--Hb_005511_130 Hb_000800_020--Hb_011381_040 Hb_007263_010 Hb_007263_010 Hb_000905_120--Hb_007263_010 Hb_001541_110 Hb_001541_110 Hb_000905_120--Hb_001541_110 Hb_003556_030 Hb_003556_030 Hb_000905_120--Hb_003556_030 Hb_003077_150 Hb_003077_150 Hb_000905_120--Hb_003077_150 Hb_000413_060 Hb_000413_060 Hb_000905_120--Hb_000413_060 Hb_007451_040 Hb_007451_040 Hb_000905_120--Hb_007451_040 Hb_003835_110 Hb_003835_110 Hb_011381_040--Hb_003835_110 Hb_011381_040--Hb_006588_190 Hb_000364_170 Hb_000364_170 Hb_011381_040--Hb_000364_170 Hb_002871_040 Hb_002871_040 Hb_011381_040--Hb_002871_040 Hb_000029_400 Hb_000029_400 Hb_011381_040--Hb_000029_400 Hb_011381_040--Hb_002027_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.500425 0.370069 6.82702 3.54624 0.882587 1.34078
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.794834 1.76925 0.353197 0.475564 1.55924

CAGE analysis