Hb_084247_010

Information

Type -
Description -
Location Contig84247: 183-533
Sequence    

Annotation

kegg
ID rcu:RCOM_0970050
description hypothetical protein
nr
ID XP_002524431.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SEL2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0970050 PE=4 SV=1
Gene Ontology
ID GO:0005618
description ring-h2 zinc finger protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_084247_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_012395_170 0.0612745111 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005276_060 0.0625856964 - - PREDICTED: cyclin-P3-1 isoform X2 [Jatropha curcas]
4 Hb_005162_090 0.0811204846 - - PREDICTED: uncharacterized protein LOC105648425 [Jatropha curcas]
5 Hb_001124_010 0.0881842678 - - PREDICTED: serine/threonine-protein kinase WNK8 isoform X2 [Jatropha curcas]
6 Hb_003929_070 0.0886527807 - - CBL-interacting serine/threonine-protein kinase 1 isoform 3 [Theobroma cacao]
7 Hb_013575_010 0.0893102132 - - Hepatocyte growth factor-regulated tyrosine kinase substrate, putative [Ricinus communis]
8 Hb_000375_350 0.0902571528 - - PREDICTED: uncharacterized protein LOC105641632 [Jatropha curcas]
9 Hb_003929_170 0.0905438329 - - PREDICTED: novel plant SNARE 13 [Jatropha curcas]
10 Hb_004754_050 0.0913632011 - - PREDICTED: uncharacterized protein LOC104433925 [Eucalyptus grandis]
11 Hb_028697_010 0.0957321622 - - PREDICTED: protein yippee-like At4g27745 [Jatropha curcas]
12 Hb_012258_010 0.0959913342 - - PREDICTED: cyclase-associated protein 1 [Jatropha curcas]
13 Hb_001087_030 0.0964849622 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
14 Hb_000329_230 0.096928186 - - PREDICTED: uncharacterized protein LOC105643152 [Jatropha curcas]
15 Hb_013358_040 0.0970067276 - - PREDICTED: stromal cell-derived factor 2-like protein [Jatropha curcas]
16 Hb_017895_040 0.098032727 - - hypothetical protein POPTR_0006s08120g [Populus trichocarpa]
17 Hb_000009_400 0.0983632967 - - PREDICTED: BTB/POZ domain-containing protein At3g50780 [Jatropha curcas]
18 Hb_004607_090 0.0984544357 - - PREDICTED: uncharacterized protein LOC105648257 [Jatropha curcas]
19 Hb_000869_080 0.0996310922 - - PREDICTED: uncharacterized protein LOC105641084 isoform X2 [Jatropha curcas]
20 Hb_164010_040 0.099880732 - - serine/threonine protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_084247_010 Hb_084247_010 Hb_012395_170 Hb_012395_170 Hb_084247_010--Hb_012395_170 Hb_005276_060 Hb_005276_060 Hb_084247_010--Hb_005276_060 Hb_005162_090 Hb_005162_090 Hb_084247_010--Hb_005162_090 Hb_001124_010 Hb_001124_010 Hb_084247_010--Hb_001124_010 Hb_003929_070 Hb_003929_070 Hb_084247_010--Hb_003929_070 Hb_013575_010 Hb_013575_010 Hb_084247_010--Hb_013575_010 Hb_012395_170--Hb_005276_060 Hb_003617_020 Hb_003617_020 Hb_012395_170--Hb_003617_020 Hb_003929_170 Hb_003929_170 Hb_012395_170--Hb_003929_170 Hb_012395_170--Hb_001124_010 Hb_000390_250 Hb_000390_250 Hb_012395_170--Hb_000390_250 Hb_000009_400 Hb_000009_400 Hb_005276_060--Hb_000009_400 Hb_001016_050 Hb_001016_050 Hb_005276_060--Hb_001016_050 Hb_005276_060--Hb_003617_020 Hb_005276_060--Hb_003929_170 Hb_062226_130 Hb_062226_130 Hb_005162_090--Hb_062226_130 Hb_000738_020 Hb_000738_020 Hb_005162_090--Hb_000738_020 Hb_000869_080 Hb_000869_080 Hb_005162_090--Hb_000869_080 Hb_139294_010 Hb_139294_010 Hb_005162_090--Hb_139294_010 Hb_012022_040 Hb_012022_040 Hb_005162_090--Hb_012022_040 Hb_000221_190 Hb_000221_190 Hb_005162_090--Hb_000221_190 Hb_016467_010 Hb_016467_010 Hb_001124_010--Hb_016467_010 Hb_001761_120 Hb_001761_120 Hb_001124_010--Hb_001761_120 Hb_002073_200 Hb_002073_200 Hb_001124_010--Hb_002073_200 Hb_164010_040 Hb_164010_040 Hb_001124_010--Hb_164010_040 Hb_007597_010 Hb_007597_010 Hb_003929_070--Hb_007597_010 Hb_001259_050 Hb_001259_050 Hb_003929_070--Hb_001259_050 Hb_003929_070--Hb_012395_170 Hb_002413_010 Hb_002413_010 Hb_003929_070--Hb_002413_010 Hb_000258_070 Hb_000258_070 Hb_003929_070--Hb_000258_070 Hb_000300_270 Hb_000300_270 Hb_003929_070--Hb_000300_270 Hb_003057_060 Hb_003057_060 Hb_013575_010--Hb_003057_060 Hb_002641_060 Hb_002641_060 Hb_013575_010--Hb_002641_060 Hb_000260_350 Hb_000260_350 Hb_013575_010--Hb_000260_350 Hb_000375_350 Hb_000375_350 Hb_013575_010--Hb_000375_350 Hb_000666_100 Hb_000666_100 Hb_013575_010--Hb_000666_100 Hb_002681_100 Hb_002681_100 Hb_013575_010--Hb_002681_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
45.1211 43.6927 49.504 78.3757 33.3327 39.9346
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
40.011 50.6375 44.0004 19.3592 41.2943

CAGE analysis