Hb_084470_010

Information

Type -
Description -
Location Contig84470: 15-317
Sequence    

Annotation

kegg
ID rcu:RCOM_0885080
description Disease resistance protein RPS5, putative
nr
ID XP_002522629.1
description Disease resistance protein RPS5, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G0
description Disease resistance protein RPS5, putative OS=Ricinus communis GN=RCOM_0885080 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60196: 173-352
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_084470_010 0.0 - - Disease resistance protein RPS5, putative [Ricinus communis]
2 Hb_009848_020 0.1764413164 - - hypothetical protein VITISV_026702 [Vitis vinifera]
3 Hb_000733_270 0.1850271718 - - PREDICTED: serine/threonine-protein phosphatase PP1-alpha catalytic subunit [Dasypus novemcinctus]
4 Hb_003157_030 0.2144222186 - - PREDICTED: exocyst complex component EXO70A1-like [Nicotiana sylvestris]
5 Hb_141212_010 0.226173357 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
6 Hb_003854_020 0.2284838433 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]
7 Hb_018118_020 0.2302438055 - - unnamed protein product [Vitis vinifera]
8 Hb_135442_010 0.2340483094 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
9 Hb_005144_030 0.2380376102 - - PREDICTED: alpha-L-fucosidase 1 [Jatropha curcas]
10 Hb_059641_010 0.2466756179 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
11 Hb_007333_040 0.2468442921 - - PREDICTED: proline-rich receptor-like protein kinase PERK1-like [Glycine max]
12 Hb_051437_010 0.2472713603 - - PREDICTED: calmodulin-interacting protein 111 isoform X2 [Jatropha curcas]
13 Hb_058702_020 0.2473131499 - - PREDICTED: uncharacterized protein LOC104604814 [Nelumbo nucifera]
14 Hb_002742_070 0.2514734018 - - PREDICTED: villin-4-like [Jatropha curcas]
15 Hb_000136_190 0.2537295873 - - PREDICTED: protein-S-isoprenylcysteine O-methyltransferase A-like isoform X1 [Jatropha curcas]
16 Hb_004724_120 0.2538199005 - - PREDICTED: ferredoxin, root R-B2 [Jatropha curcas]
17 Hb_054586_020 0.2549851893 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
18 Hb_054885_020 0.2580128501 - - -
19 Hb_007846_040 0.2583661407 - - PREDICTED: uncharacterized protein LOC105646691 [Jatropha curcas]
20 Hb_000330_160 0.2595548903 - - hypothetical protein JCGZ_04462 [Jatropha curcas]

Gene co-expression network

sample Hb_084470_010 Hb_084470_010 Hb_009848_020 Hb_009848_020 Hb_084470_010--Hb_009848_020 Hb_000733_270 Hb_000733_270 Hb_084470_010--Hb_000733_270 Hb_003157_030 Hb_003157_030 Hb_084470_010--Hb_003157_030 Hb_141212_010 Hb_141212_010 Hb_084470_010--Hb_141212_010 Hb_003854_020 Hb_003854_020 Hb_084470_010--Hb_003854_020 Hb_018118_020 Hb_018118_020 Hb_084470_010--Hb_018118_020 Hb_009848_020--Hb_003854_020 Hb_059641_010 Hb_059641_010 Hb_009848_020--Hb_059641_010 Hb_000123_030 Hb_000123_030 Hb_009848_020--Hb_000123_030 Hb_144550_020 Hb_144550_020 Hb_009848_020--Hb_144550_020 Hb_000330_160 Hb_000330_160 Hb_009848_020--Hb_000330_160 Hb_004724_120 Hb_004724_120 Hb_000733_270--Hb_004724_120 Hb_002235_140 Hb_002235_140 Hb_000733_270--Hb_002235_140 Hb_000021_100 Hb_000021_100 Hb_000733_270--Hb_000021_100 Hb_007785_010 Hb_007785_010 Hb_000733_270--Hb_007785_010 Hb_003073_170 Hb_003073_170 Hb_000733_270--Hb_003073_170 Hb_006501_020 Hb_006501_020 Hb_003157_030--Hb_006501_020 Hb_002815_060 Hb_002815_060 Hb_003157_030--Hb_002815_060 Hb_002742_070 Hb_002742_070 Hb_003157_030--Hb_002742_070 Hb_031069_020 Hb_031069_020 Hb_003157_030--Hb_031069_020 Hb_003376_070 Hb_003376_070 Hb_003157_030--Hb_003376_070 Hb_141547_010 Hb_141547_010 Hb_003157_030--Hb_141547_010 Hb_026337_010 Hb_026337_010 Hb_141212_010--Hb_026337_010 Hb_063480_020 Hb_063480_020 Hb_141212_010--Hb_063480_020 Hb_054586_020 Hb_054586_020 Hb_141212_010--Hb_054586_020 Hb_054885_020 Hb_054885_020 Hb_141212_010--Hb_054885_020 Hb_097347_010 Hb_097347_010 Hb_141212_010--Hb_097347_010 Hb_049160_010 Hb_049160_010 Hb_141212_010--Hb_049160_010 Hb_003854_020--Hb_059641_010 Hb_003854_020--Hb_000123_030 Hb_000136_190 Hb_000136_190 Hb_003854_020--Hb_000136_190 Hb_003854_020--Hb_144550_020 Hb_003060_050 Hb_003060_050 Hb_003854_020--Hb_003060_050 Hb_159307_010 Hb_159307_010 Hb_018118_020--Hb_159307_010 Hb_002737_020 Hb_002737_020 Hb_018118_020--Hb_002737_020 Hb_002370_040 Hb_002370_040 Hb_018118_020--Hb_002370_040 Hb_005715_020 Hb_005715_020 Hb_018118_020--Hb_005715_020 Hb_116638_010 Hb_116638_010 Hb_018118_020--Hb_116638_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.81074 9.27865 0.831205 6.33107 3.61192 21.3291
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.821905 7.46197 1.33939

CAGE analysis