Hb_084490_010

Information

Type -
Description -
Location Contig84490: 1262-1744
Sequence    

Annotation

kegg
ID rcu:RCOM_0825020
description hypothetical protein
nr
ID XP_012069128.1
description PREDICTED: protein root UVB sensitive 6 isoform X2 [Jatropha curcas]
swissprot
ID Q93YU2
description Protein root UVB sensitive 6 OS=Arabidopsis thaliana GN=RUS6 PE=2 SV=1
trembl
ID A0A067L9V0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24893 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_084490_010 0.0 - - PREDICTED: protein root UVB sensitive 6 isoform X2 [Jatropha curcas]
2 Hb_007017_040 0.0757365393 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
3 Hb_000205_240 0.0775334172 - - ubiquitin-protein ligase, putative [Ricinus communis]
4 Hb_012239_020 0.0899130218 - - PREDICTED: protein VAC14 homolog [Jatropha curcas]
5 Hb_003925_040 0.0970074595 transcription factor TF Family: C2H2 PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Jatropha curcas]
6 Hb_003688_180 0.0970100887 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
7 Hb_000815_240 0.0973339312 - - PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Jatropha curcas]
8 Hb_002232_480 0.0975801018 - - PREDICTED: telomerase reverse transcriptase [Jatropha curcas]
9 Hb_000802_090 0.0980169543 - - ornithine aminotransferase, putative [Ricinus communis]
10 Hb_000120_030 0.0989138006 - - PREDICTED: uncharacterized protein LOC105630385 isoform X1 [Jatropha curcas]
11 Hb_003398_080 0.1000445936 - - PREDICTED: telomere repeat-binding protein 4 isoform X3 [Jatropha curcas]
12 Hb_004994_240 0.100821272 - - hypothetical protein PRUPE_ppa004633mg [Prunus persica]
13 Hb_000327_140 0.1051078688 - - PREDICTED: probable adenylate kinase 6, chloroplastic [Jatropha curcas]
14 Hb_001717_010 0.1066103284 - - F-box and wd40 domain protein, putative [Ricinus communis]
15 Hb_013241_010 0.1067253337 - - PREDICTED: small G protein signaling modulator 2 isoform X1 [Jatropha curcas]
16 Hb_000347_400 0.1069645274 - - PREDICTED: probable GTP diphosphokinase RSH2, chloroplastic [Jatropha curcas]
17 Hb_000951_130 0.107564777 - - PREDICTED: transcription factor GTE2-like [Jatropha curcas]
18 Hb_001300_010 0.1077624247 transcription factor TF Family: C3H nucleic acid binding protein, putative [Ricinus communis]
19 Hb_009627_030 0.1079802738 - - PREDICTED: F-box/kelch-repeat protein At3g23880-like [Jatropha curcas]
20 Hb_006573_040 0.1084131087 - - DNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_084490_010 Hb_084490_010 Hb_007017_040 Hb_007017_040 Hb_084490_010--Hb_007017_040 Hb_000205_240 Hb_000205_240 Hb_084490_010--Hb_000205_240 Hb_012239_020 Hb_012239_020 Hb_084490_010--Hb_012239_020 Hb_003925_040 Hb_003925_040 Hb_084490_010--Hb_003925_040 Hb_003688_180 Hb_003688_180 Hb_084490_010--Hb_003688_180 Hb_000815_240 Hb_000815_240 Hb_084490_010--Hb_000815_240 Hb_004994_240 Hb_004994_240 Hb_007017_040--Hb_004994_240 Hb_002232_480 Hb_002232_480 Hb_007017_040--Hb_002232_480 Hb_007017_040--Hb_003688_180 Hb_003398_080 Hb_003398_080 Hb_007017_040--Hb_003398_080 Hb_011360_050 Hb_011360_050 Hb_007017_040--Hb_011360_050 Hb_000363_120 Hb_000363_120 Hb_000205_240--Hb_000363_120 Hb_000802_090 Hb_000802_090 Hb_000205_240--Hb_000802_090 Hb_000649_250 Hb_000649_250 Hb_000205_240--Hb_000649_250 Hb_006738_050 Hb_006738_050 Hb_000205_240--Hb_006738_050 Hb_000205_240--Hb_003398_080 Hb_000738_020 Hb_000738_020 Hb_012239_020--Hb_000738_020 Hb_000484_130 Hb_000484_130 Hb_012239_020--Hb_000484_130 Hb_000086_420 Hb_000086_420 Hb_012239_020--Hb_000086_420 Hb_012239_020--Hb_004994_240 Hb_001300_010 Hb_001300_010 Hb_012239_020--Hb_001300_010 Hb_000327_140 Hb_000327_140 Hb_012239_020--Hb_000327_140 Hb_003147_060 Hb_003147_060 Hb_003925_040--Hb_003147_060 Hb_004774_020 Hb_004774_020 Hb_003925_040--Hb_004774_020 Hb_009545_090 Hb_009545_090 Hb_003925_040--Hb_009545_090 Hb_004108_240 Hb_004108_240 Hb_003925_040--Hb_004108_240 Hb_002042_170 Hb_002042_170 Hb_003925_040--Hb_002042_170 Hb_003688_180--Hb_011360_050 Hb_020178_040 Hb_020178_040 Hb_003688_180--Hb_020178_040 Hb_017387_010 Hb_017387_010 Hb_003688_180--Hb_017387_010 Hb_000753_230 Hb_000753_230 Hb_003688_180--Hb_000753_230 Hb_002982_020 Hb_002982_020 Hb_003688_180--Hb_002982_020 Hb_000390_250 Hb_000390_250 Hb_000815_240--Hb_000390_250 Hb_000991_040 Hb_000991_040 Hb_000815_240--Hb_000991_040 Hb_005015_080 Hb_005015_080 Hb_000815_240--Hb_005015_080 Hb_000329_230 Hb_000329_230 Hb_000815_240--Hb_000329_230 Hb_000395_040 Hb_000395_040 Hb_000815_240--Hb_000395_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.21077 28.4381 16.6365 19.29 9.15301 9.26056
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.53369 13.7346 15.7741 10.3404 7.24838

CAGE analysis