Hb_085327_010

Information

Type -
Description -
Location Contig85327: 3-652
Sequence    

Annotation

kegg
ID rcu:RCOM_1096970
description S-locus-specific glycoprotein S6 precursor, putative (EC:2.7.10.2)
nr
ID XP_012091449.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
swissprot
ID P22552
description S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1
trembl
ID A0A067JDL7
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_21324 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase at1g61550

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_085327_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
2 Hb_004041_080 0.0816819173 - - PREDICTED: uncharacterized protein LOC105639186 [Jatropha curcas]
3 Hb_005663_050 0.1266317592 - - amino acid transporter, putative [Ricinus communis]
4 Hb_000334_250 0.1386923118 - - Polygalacturonase precursor, putative [Ricinus communis]
5 Hb_001454_340 0.150984926 - - ATDI21 [Manihot esculenta]
6 Hb_009515_010 0.1518687236 transcription factor TF Family: HB hypothetical protein JCGZ_15302 [Jatropha curcas]
7 Hb_033006_040 0.1559973958 - - sulfate transporter, putative [Ricinus communis]
8 Hb_003119_070 0.1591282325 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
9 Hb_002204_030 0.1615352986 - - PREDICTED: uncharacterized protein LOC105764710 isoform X3 [Gossypium raimondii]
10 Hb_004136_050 0.1629725974 - - -
11 Hb_000472_030 0.1672781942 - - -
12 Hb_001640_020 0.1700234275 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Jatropha curcas]
13 Hb_002003_020 0.17120835 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
14 Hb_004341_010 0.1715261361 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
15 Hb_001157_150 0.1719860302 - - PREDICTED: transmembrane protein 45A-like [Jatropha curcas]
16 Hb_001283_010 0.1723792778 transcription factor TF Family: LOB LOB domain-containing protein 15 [Populus tremula x Populus tremuloides]
17 Hb_007163_020 0.1734631052 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
18 Hb_000077_470 0.1738261129 - - PREDICTED: anthranilate N-methyltransferase-like [Jatropha curcas]
19 Hb_000057_010 0.174074494 - - PREDICTED: probable protein phosphatase 2C 59 [Jatropha curcas]
20 Hb_050484_010 0.1745783693 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_085327_010 Hb_085327_010 Hb_004041_080 Hb_004041_080 Hb_085327_010--Hb_004041_080 Hb_005663_050 Hb_005663_050 Hb_085327_010--Hb_005663_050 Hb_000334_250 Hb_000334_250 Hb_085327_010--Hb_000334_250 Hb_001454_340 Hb_001454_340 Hb_085327_010--Hb_001454_340 Hb_009515_010 Hb_009515_010 Hb_085327_010--Hb_009515_010 Hb_033006_040 Hb_033006_040 Hb_085327_010--Hb_033006_040 Hb_020581_030 Hb_020581_030 Hb_004041_080--Hb_020581_030 Hb_004041_080--Hb_005663_050 Hb_004041_080--Hb_000334_250 Hb_004041_080--Hb_001454_340 Hb_004041_080--Hb_009515_010 Hb_003119_070 Hb_003119_070 Hb_005663_050--Hb_003119_070 Hb_002003_020 Hb_002003_020 Hb_005663_050--Hb_002003_020 Hb_004136_050 Hb_004136_050 Hb_005663_050--Hb_004136_050 Hb_002671_110 Hb_002671_110 Hb_005663_050--Hb_002671_110 Hb_001283_010 Hb_001283_010 Hb_005663_050--Hb_001283_010 Hb_000334_250--Hb_009515_010 Hb_002204_030 Hb_002204_030 Hb_000334_250--Hb_002204_030 Hb_000302_060 Hb_000302_060 Hb_000334_250--Hb_000302_060 Hb_005218_070 Hb_005218_070 Hb_000334_250--Hb_005218_070 Hb_000472_030 Hb_000472_030 Hb_000334_250--Hb_000472_030 Hb_005228_170 Hb_005228_170 Hb_000334_250--Hb_005228_170 Hb_001454_340--Hb_033006_040 Hb_006711_010 Hb_006711_010 Hb_001454_340--Hb_006711_010 Hb_000380_040 Hb_000380_040 Hb_001454_340--Hb_000380_040 Hb_050484_010 Hb_050484_010 Hb_001454_340--Hb_050484_010 Hb_001454_340--Hb_003119_070 Hb_002007_230 Hb_002007_230 Hb_001454_340--Hb_002007_230 Hb_009515_010--Hb_002204_030 Hb_009515_010--Hb_000302_060 Hb_009515_010--Hb_005218_070 Hb_000608_080 Hb_000608_080 Hb_009515_010--Hb_000608_080 Hb_000141_230 Hb_000141_230 Hb_009515_010--Hb_000141_230 Hb_033006_040--Hb_000380_040 Hb_009083_080 Hb_009083_080 Hb_033006_040--Hb_009083_080 Hb_001157_150 Hb_001157_150 Hb_033006_040--Hb_001157_150 Hb_000185_060 Hb_000185_060 Hb_033006_040--Hb_000185_060 Hb_000300_570 Hb_000300_570 Hb_033006_040--Hb_000300_570
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0644682 3.83455 0 1.62744 0 0.355579
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.15982 0

CAGE analysis