Hb_086002_010

Information

Type -
Description -
Location Contig86002: 414-992
Sequence    

Annotation

kegg
ID rcu:RCOM_0574920
description kinase, putative (EC:2.7.10.1)
nr
ID XP_012066189.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067L2Z5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23768 PE=3 SV=1
Gene Ontology
ID GO:0004714
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_086002_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_000061_100 0.156138616 - - hypothetical protein CISIN_1g0053742mg, partial [Citrus sinensis]
3 Hb_002475_010 0.1715488969 - - hypothetical protein JCGZ_22530 [Jatropha curcas]
4 Hb_006198_060 0.1778851836 - - PREDICTED: protein SULFUR DEFICIENCY-INDUCED 1 [Jatropha curcas]
5 Hb_000116_350 0.1808487814 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
6 Hb_000685_130 0.1821197668 - - PREDICTED: uncharacterized protein LOC105351820 [Fragaria vesca subsp. vesca]
7 Hb_008040_060 0.1850083581 - - PREDICTED: potassium transporter 8 [Jatropha curcas]
8 Hb_004994_190 0.1859733518 - - PREDICTED: (+)-neomenthol dehydrogenase-like [Jatropha curcas]
9 Hb_004166_010 0.186146316 - - PREDICTED: uncharacterized protein LOC105638508 [Jatropha curcas]
10 Hb_000808_160 0.1864035617 - - PREDICTED: uncharacterized protein LOC105647443 [Jatropha curcas]
11 Hb_000705_130 0.1880986449 - - conserved hypothetical protein [Ricinus communis]
12 Hb_006052_040 0.1881130839 - - pyruvate decarboxylase [Hevea brasiliensis]
13 Hb_134932_010 0.1891181148 - - PREDICTED: wall-associated receptor kinase-like 1, partial [Populus euphratica]
14 Hb_002571_010 0.1899176415 - - cationic amino acid transporter, putative [Ricinus communis]
15 Hb_000522_130 0.1899427864 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
16 Hb_001699_050 0.1909069055 transcription factor TF Family: MYB hypothetical protein POPTR_0005s11410g [Populus trichocarpa]
17 Hb_041290_030 0.1927193156 - - PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
18 Hb_000094_010 0.1933426743 - - lrr receptor protein kinase, putative [Ricinus communis]
19 Hb_003914_050 0.1945366443 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
20 Hb_002529_080 0.1958218285 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase [Jatropha curcas]

Gene co-expression network

sample Hb_086002_010 Hb_086002_010 Hb_000061_100 Hb_000061_100 Hb_086002_010--Hb_000061_100 Hb_002475_010 Hb_002475_010 Hb_086002_010--Hb_002475_010 Hb_006198_060 Hb_006198_060 Hb_086002_010--Hb_006198_060 Hb_000116_350 Hb_000116_350 Hb_086002_010--Hb_000116_350 Hb_000685_130 Hb_000685_130 Hb_086002_010--Hb_000685_130 Hb_008040_060 Hb_008040_060 Hb_086002_010--Hb_008040_060 Hb_004166_010 Hb_004166_010 Hb_000061_100--Hb_004166_010 Hb_000808_160 Hb_000808_160 Hb_000061_100--Hb_000808_160 Hb_002571_010 Hb_002571_010 Hb_000061_100--Hb_002571_010 Hb_000172_080 Hb_000172_080 Hb_000061_100--Hb_000172_080 Hb_000363_110 Hb_000363_110 Hb_000061_100--Hb_000363_110 Hb_000995_010 Hb_000995_010 Hb_000061_100--Hb_000995_010 Hb_004122_020 Hb_004122_020 Hb_002475_010--Hb_004122_020 Hb_145139_010 Hb_145139_010 Hb_002475_010--Hb_145139_010 Hb_002968_010 Hb_002968_010 Hb_002475_010--Hb_002968_010 Hb_006052_040 Hb_006052_040 Hb_002475_010--Hb_006052_040 Hb_002097_210 Hb_002097_210 Hb_002475_010--Hb_002097_210 Hb_000656_370 Hb_000656_370 Hb_002475_010--Hb_000656_370 Hb_006198_060--Hb_006052_040 Hb_006198_060--Hb_004122_020 Hb_041290_030 Hb_041290_030 Hb_006198_060--Hb_041290_030 Hb_000123_310 Hb_000123_310 Hb_006198_060--Hb_000123_310 Hb_000338_030 Hb_000338_030 Hb_006198_060--Hb_000338_030 Hb_000579_220 Hb_000579_220 Hb_006198_060--Hb_000579_220 Hb_004945_050 Hb_004945_050 Hb_000116_350--Hb_004945_050 Hb_008550_030 Hb_008550_030 Hb_000116_350--Hb_008550_030 Hb_000060_100 Hb_000060_100 Hb_000116_350--Hb_000060_100 Hb_000116_350--Hb_000061_100 Hb_002341_040 Hb_002341_040 Hb_000116_350--Hb_002341_040 Hb_090306_010 Hb_090306_010 Hb_000116_350--Hb_090306_010 Hb_000412_090 Hb_000412_090 Hb_000685_130--Hb_000412_090 Hb_134932_010 Hb_134932_010 Hb_000685_130--Hb_134932_010 Hb_004994_190 Hb_004994_190 Hb_000685_130--Hb_004994_190 Hb_001515_030 Hb_001515_030 Hb_000685_130--Hb_001515_030 Hb_002045_220 Hb_002045_220 Hb_000685_130--Hb_002045_220 Hb_005569_030 Hb_005569_030 Hb_000685_130--Hb_005569_030 Hb_002529_080 Hb_002529_080 Hb_008040_060--Hb_002529_080 Hb_001248_170 Hb_001248_170 Hb_008040_060--Hb_001248_170 Hb_003914_050 Hb_003914_050 Hb_008040_060--Hb_003914_050 Hb_000027_060 Hb_000027_060 Hb_008040_060--Hb_000027_060 Hb_000000_070 Hb_000000_070 Hb_008040_060--Hb_000000_070 Hb_008667_030 Hb_008667_030 Hb_008040_060--Hb_008667_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.39611 0.614239 0.914243 0.129133 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.319565 0 0 0.688107 0.644187

CAGE analysis