Hb_086639_050

Information

Type -
Description -
Location Contig86639: 31342-38361
Sequence    

Annotation

kegg
ID rcu:RCOM_0791410
description hypothetical protein
nr
ID XP_012088106.1
description PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JWE9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25621 PE=4 SV=1
Gene Ontology
ID GO:0005768
description o-fucosyltransferase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61012: 31632-37610
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_086639_050 0.0 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
2 Hb_002411_160 0.0937711655 - - PREDICTED: uncharacterized protein LOC105631262 isoform X1 [Jatropha curcas]
3 Hb_080147_020 0.1021346114 - - 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
4 Hb_001117_080 0.1046302558 - - PREDICTED: mitogen-activated protein kinase kinase 2 isoform X1 [Jatropha curcas]
5 Hb_002249_170 0.1073396978 - - copine, putative [Ricinus communis]
6 Hb_000567_090 0.108420684 - - PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Jatropha curcas]
7 Hb_000111_390 0.1087282353 - - PREDICTED: uncharacterized protein LOC105631262 isoform X1 [Jatropha curcas]
8 Hb_001318_150 0.1164145232 - - PREDICTED: shaggy-related protein kinase alpha-like [Jatropha curcas]
9 Hb_000529_040 0.1166518846 - - PREDICTED: uncharacterized protein LOC105641671 [Jatropha curcas]
10 Hb_054865_050 0.1229761697 - - calcium-dependent protein kinase, putative [Ricinus communis]
11 Hb_005064_070 0.1231981752 - - PREDICTED: uncharacterized protein LOC105648318 [Jatropha curcas]
12 Hb_000015_150 0.1260742783 - - Ubiquitin-conjugating enzyme E2 7 family protein [Populus trichocarpa]
13 Hb_000098_180 0.127904745 - - PREDICTED: uncharacterized protein LOC105633342 isoform X2 [Jatropha curcas]
14 Hb_000329_790 0.1308135329 - - PREDICTED: uncharacterized protein LOC105643367 [Jatropha curcas]
15 Hb_004679_040 0.1350822102 - - PREDICTED: rop guanine nucleotide exchange factor 1 [Jatropha curcas]
16 Hb_002432_050 0.136487718 - - PREDICTED: uncharacterized protein LOC105648523 [Jatropha curcas]
17 Hb_004837_220 0.1433281676 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
18 Hb_014361_170 0.1438974646 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 37 [Jatropha curcas]
19 Hb_000890_020 0.1438993199 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
20 Hb_000375_060 0.1451609309 transcription factor TF Family: C2H2 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_086639_050 Hb_086639_050 Hb_002411_160 Hb_002411_160 Hb_086639_050--Hb_002411_160 Hb_080147_020 Hb_080147_020 Hb_086639_050--Hb_080147_020 Hb_001117_080 Hb_001117_080 Hb_086639_050--Hb_001117_080 Hb_002249_170 Hb_002249_170 Hb_086639_050--Hb_002249_170 Hb_000567_090 Hb_000567_090 Hb_086639_050--Hb_000567_090 Hb_000111_390 Hb_000111_390 Hb_086639_050--Hb_000111_390 Hb_002411_160--Hb_080147_020 Hb_001001_090 Hb_001001_090 Hb_002411_160--Hb_001001_090 Hb_000649_330 Hb_000649_330 Hb_002411_160--Hb_000649_330 Hb_114943_020 Hb_114943_020 Hb_002411_160--Hb_114943_020 Hb_000098_180 Hb_000098_180 Hb_002411_160--Hb_000098_180 Hb_080147_020--Hb_000567_090 Hb_000098_150 Hb_000098_150 Hb_080147_020--Hb_000098_150 Hb_001221_580 Hb_001221_580 Hb_080147_020--Hb_001221_580 Hb_004108_210 Hb_004108_210 Hb_080147_020--Hb_004108_210 Hb_001117_080--Hb_000098_180 Hb_002432_050 Hb_002432_050 Hb_001117_080--Hb_002432_050 Hb_001117_080--Hb_000649_330 Hb_001117_080--Hb_000567_090 Hb_001117_080--Hb_002249_170 Hb_001318_150 Hb_001318_150 Hb_002249_170--Hb_001318_150 Hb_054865_050 Hb_054865_050 Hb_002249_170--Hb_054865_050 Hb_003106_200 Hb_003106_200 Hb_002249_170--Hb_003106_200 Hb_011671_110 Hb_011671_110 Hb_002249_170--Hb_011671_110 Hb_001247_210 Hb_001247_210 Hb_002249_170--Hb_001247_210 Hb_052135_020 Hb_052135_020 Hb_000567_090--Hb_052135_020 Hb_000567_090--Hb_001221_580 Hb_000567_090--Hb_000098_180 Hb_000111_390--Hb_011671_110 Hb_001627_010 Hb_001627_010 Hb_000111_390--Hb_001627_010 Hb_047442_010 Hb_047442_010 Hb_000111_390--Hb_047442_010 Hb_000111_390--Hb_002249_170 Hb_000111_390--Hb_001318_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.774311 6.45603 12.1911 6.28786 0.396439 1.45198
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.15757 0.759066 0.920987 4.59243 3.2568

CAGE analysis