Hb_086639_080

Information

Type -
Description -
Location Contig86639: 47739-51247
Sequence    

Annotation

kegg
ID rcu:RCOM_0791080
description hypothetical protein
nr
ID XP_002525944.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID B9SIX5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0791080 PE=4 SV=1
Gene Ontology
ID GO:0016757
description o-fucosyltransferase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61016: 47763-49330 , PASA_asmbl_61017: 49367-51341
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_086639_080 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000139_530 0.0744364091 - - conserved hypothetical protein [Ricinus communis]
3 Hb_007286_020 0.0786722709 - - hypothetical protein L484_010675 [Morus notabilis]
4 Hb_000622_110 0.0787096503 - - cmp-sialic acid transporter, putative [Ricinus communis]
5 Hb_000002_480 0.0801494652 - - PREDICTED: protein WVD2-like 1 isoform X2 [Jatropha curcas]
6 Hb_000331_370 0.0808872999 - - Glyceraldehyde-3-phosphate dehydrogenase-2C cytosolic [Gossypium arboreum]
7 Hb_004102_170 0.0835441375 - - PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Jatropha curcas]
8 Hb_000890_230 0.0843665179 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
9 Hb_000320_290 0.0860028561 - - PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]
10 Hb_188063_050 0.0868343826 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
11 Hb_005797_010 0.0942183445 - - PREDICTED: lysophospholipid acyltransferase 1-like [Jatropha curcas]
12 Hb_004064_040 0.0974818551 - - PREDICTED: Down syndrome critical region protein 3 homolog isoform X3 [Jatropha curcas]
13 Hb_005062_110 0.0991165826 - - PREDICTED: transmembrane 9 superfamily member 1 [Jatropha curcas]
14 Hb_000371_090 0.099194258 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Jatropha curcas]
15 Hb_002486_050 0.0999471519 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
16 Hb_007137_050 0.1008006811 - - Uncharacterized protein isoform 1 [Theobroma cacao]
17 Hb_011214_160 0.1032401359 - - PREDICTED: coatomer subunit delta [Jatropha curcas]
18 Hb_000836_300 0.1041668681 - - caax prenyl protease ste24, putative [Ricinus communis]
19 Hb_000696_010 0.104390929 - - RING-H2 finger protein ATL4M, putative [Ricinus communis]
20 Hb_005535_080 0.1044574499 - - hypothetical protein CICLE_v10012766mg [Citrus clementina]

Gene co-expression network

sample Hb_086639_080 Hb_086639_080 Hb_000139_530 Hb_000139_530 Hb_086639_080--Hb_000139_530 Hb_007286_020 Hb_007286_020 Hb_086639_080--Hb_007286_020 Hb_000622_110 Hb_000622_110 Hb_086639_080--Hb_000622_110 Hb_000002_480 Hb_000002_480 Hb_086639_080--Hb_000002_480 Hb_000331_370 Hb_000331_370 Hb_086639_080--Hb_000331_370 Hb_004102_170 Hb_004102_170 Hb_086639_080--Hb_004102_170 Hb_005797_010 Hb_005797_010 Hb_000139_530--Hb_005797_010 Hb_011214_160 Hb_011214_160 Hb_000139_530--Hb_011214_160 Hb_001087_030 Hb_001087_030 Hb_000139_530--Hb_001087_030 Hb_000009_400 Hb_000009_400 Hb_000139_530--Hb_000009_400 Hb_000139_530--Hb_004102_170 Hb_001051_070 Hb_001051_070 Hb_007286_020--Hb_001051_070 Hb_007286_020--Hb_004102_170 Hb_010042_030 Hb_010042_030 Hb_007286_020--Hb_010042_030 Hb_000679_100 Hb_000679_100 Hb_007286_020--Hb_000679_100 Hb_002486_050 Hb_002486_050 Hb_007286_020--Hb_002486_050 Hb_000256_230 Hb_000256_230 Hb_000622_110--Hb_000256_230 Hb_005062_110 Hb_005062_110 Hb_000622_110--Hb_005062_110 Hb_000622_110--Hb_002486_050 Hb_000926_340 Hb_000926_340 Hb_000622_110--Hb_000926_340 Hb_003209_130 Hb_003209_130 Hb_000622_110--Hb_003209_130 Hb_000002_480--Hb_000331_370 Hb_012651_010 Hb_012651_010 Hb_000002_480--Hb_012651_010 Hb_000890_230 Hb_000890_230 Hb_000002_480--Hb_000890_230 Hb_000002_480--Hb_000139_530 Hb_000371_090 Hb_000371_090 Hb_000002_480--Hb_000371_090 Hb_000107_080 Hb_000107_080 Hb_000331_370--Hb_000107_080 Hb_000331_370--Hb_000890_230 Hb_002660_150 Hb_002660_150 Hb_000331_370--Hb_002660_150 Hb_000028_600 Hb_000028_600 Hb_000331_370--Hb_000028_600 Hb_000787_160 Hb_000787_160 Hb_004102_170--Hb_000787_160 Hb_000049_020 Hb_000049_020 Hb_004102_170--Hb_000049_020 Hb_000146_040 Hb_000146_040 Hb_004102_170--Hb_000146_040 Hb_000345_160 Hb_000345_160 Hb_004102_170--Hb_000345_160 Hb_001405_210 Hb_001405_210 Hb_004102_170--Hb_001405_210 Hb_004102_170--Hb_005797_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.37747 5.14841 7.5657 17.1898 5.8353 6.97811
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.95249 3.26487 2.96329 6.62657 5.19503

CAGE analysis